RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 NDUFAF1Q9Y375 327 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 CACNG2Q9Y698 323 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 SNAP29O95721 258 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 AVPP01185 164 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 IGHV2-5P01817 119 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 ACADSP16219 412 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 MAKP20794 623 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 STOMP27105 288 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 ATP4BP51164 291 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 PCBP3P57721 371 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 TAS2R41P59536 307 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 LCN2P80188 198 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 TOP3AQ13472 1001 aaPredicted RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 SELPLGQ14242 412 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 RBMS3Q6XE24 437 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 OR4D11Q8NGI4 311 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 C22orf15Q8WYQ4 148 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 THOC1Q96FV9 657 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 CGREF1Q99674 301 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 G6PC2Q9NQR9 355 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 INIPQ9NRY2 104 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 FAM53CQ9NYF3 392 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 NKIRAS2Q9NYR9 191 aa12.66□□□□□ -0.38
CTSA-216ENST00000607212 STX18Q9P2W9 335 aaKnown RBP12.66□□□□□ -0.38
CTSA-216ENST00000607212 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 J3QLI3 93 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 TRMUO75648 421 aaKnown RBP12.65□□□□□ -0.38
CTSA-216ENST00000607212 SLC2A10O95528 541 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 ASAH2BP0C7U1 165 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 FUT1P19526 365 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 FPR2P25090 351 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 CDAP32320 146 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 AQP2P41181 271 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 GUCA1AP43080 201 aaPredicted RBP12.65□□□□□ -0.38
CTSA-216ENST00000607212 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 THEM4Q5T1C6 240 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 C1orf229Q6ZS94 237 aaPredicted RBP12.65□□□□□ -0.38
CTSA-216ENST00000607212 USP43Q70EL4 1123 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 OR10A6Q8NH74 314 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 PFN4Q8NHR9 129 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 RASSF5Q8WWW0 418 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 ASB10Q8WXI3 467 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 SGTBQ96EQ0 304 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 TMPRSS13Q9BYE2 586 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 SLC19A3Q9BZV2 496 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
CTSA-216ENST00000607212 WIPF1O43516 503 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 OR7A10O76100 309 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 THY1P04216 161 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 ZNF32P17041 273 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 PCGF2P35227 344 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 ERVK-25P63136 954 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 TAF11Q15544 211 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 NRN1LQ496H8 165 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 IPCEF1Q8WWN9 437 aaPredicted RBP12.64□□□□□ -0.39
CTSA-216ENST00000607212 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
CTSA-216ENST00000607212 NANOGQ9H9S0 305 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 ZNF446Q9NWS9 450 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 SH3GLB1Q9Y371 365 aa12.64□□□□□ -0.39
CTSA-216ENST00000607212 ARHGAP32A7KAX9 2087 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 TIMM8AO60220 97 aaPredicted RBP12.63□□□□□ -0.39
CTSA-216ENST00000607212 SHOX2O60902 331 aaPredicted RBP12.63□□□□□ -0.39
CTSA-216ENST00000607212 DEAF1O75398 565 aaPredicted RBP12.63□□□□□ -0.39
CTSA-216ENST00000607212 PRSS23O95084 383 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 LYPD3O95274 346 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 IGHV3-13P01766 116 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 MT-ND1P03886 318 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 NR2C1P13056 603 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 MPV17P39210 176 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 COMPP49747 757 aaPredicted RBP12.63□□□□□ -0.39
CTSA-216ENST00000607212 ARHGDIAP52565 204 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 UGT2B15P54855 530 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 FAM209AQ5JX71 171 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 AGBL2Q5U5Z8 902 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 ALDH16A1Q8IZ83 802 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 OR2J1Q9GZK6 312 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 CYSLTR2Q9NS75 346 aa12.63□□□□□ -0.39
CTSA-216ENST00000607212 A0A1W2PPL8 197 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms