RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 BCL2A1Q16548 175 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 MEP1BQ16820 701 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 TEX30Q5JUR7 227 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 SLC18B1Q6NT16 456 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 SLC25A47Q6Q0C1 308 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 TRILQ7L0X0 811 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.19■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF454Q8N9F8 522 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 ZIC4Q8N9L1 334 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 HAVCR2Q8TDQ0 301 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 ABTB1Q969K4 478 aaPredicted RBP19.19■□□□□ 0.66
USP6NL-204ENST00000606752 KCTD7Q96MP8 289 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 DACH2Q96NX9 599 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 MRM2Q9UI43 246 aaKnown RBP19.19■□□□□ 0.66
USP6NL-204ENST00000606752 PMF1-BGLAPU3KQ54 211 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 TRAV17A0A0B4J275 112 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 GAAP10253 952 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF708P17019 499 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 TGM4P49221 684 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 CLDN18P56856 261 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 SLC3A1Q07837 685 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 CDK5R1Q15078 307 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 PCK2Q16822 640 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 OTPQ5XKR4 325 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 FAM220AQ7Z4H9 259 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 SNIP1Q8TAD8 396 aaKnown RBP19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ZFAND2BQ8WV99 257 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ROBO4Q8WZ75 1007 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 MCHR2Q969V1 340 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 OR2M2Q96R28 347 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 CCDC59Q9P031 241 aaKnown RBP19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ING1Q9UK53 422 aaPredicted RBP19.18■□□□□ 0.66
USP6NL-204ENST00000606752 SPTBN2O15020 2390 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 GABRPO00591 440 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ACTL6AO96019 429 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 CD1AP06126 327 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 OR8G3PP0DMU2 310 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 LAP3P28838 519 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 MRPL28Q13084 256 aaKnown RBP19.18■□□□□ 0.66
USP6NL-204ENST00000606752 MEIOBQ8N635 442 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 YIPF7Q8N8F6 280 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 GHSRQ92847 366 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 SMIM19Q96E16 107 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 PGLYRP3Q96LB9 341 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 TTYH2Q9BSA4 534 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 GLTPQ9NZD2 209 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 IKZF2Q9UKS7 526 aa19.18■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF716A6NP11 495 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 RGS9O75916 674 aaPredicted RBP19.17■□□□□ 0.66
USP6NL-204ENST00000606752 ABHD16AO95870 558 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 QDPRP09417 244 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 EDNRAP25101 427 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 PSMB10P40306 273 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 SRYQ05066 204 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 RNFT1Q5M7Z0 435 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 LIPNQ5VXI9 398 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 ABLIM2Q6H8Q1 611 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 LRFN4Q6PJG9 635 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 TMEM91Q6ZNR0 172 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 MS4A15Q8N5U1 240 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 INTS12Q96CB8 462 aaKnown RBP19.17■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF845Q96IR2 970 aaPredicted RBP19.17■□□□□ 0.66
USP6NL-204ENST00000606752 DCLRE1CQ96SD1 692 aaKnown RBP19.17■□□□□ 0.66
USP6NL-204ENST00000606752 AMELYQ99218 206 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 ZDHHC11Q9H8X9 412 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 MSRB2Q9Y3D2 182 aa19.17■□□□□ 0.66
USP6NL-204ENST00000606752 TRBV2A0A0J9YWF9 115 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 CYTIPO60759 359 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 UPK3AO75631 287 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 AQP8O94778 261 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF432O94892 652 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ITGB2P05107 769 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 RPS19P39019 145 aaKnown RBP19.16■□□□□ 0.66
USP6NL-204ENST00000606752 CSNK1A1P48729 337 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 LINC00299Q6ZSB3 139 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 TMEM123Q8N131 208 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 OR6N1Q8NGY5 312 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 NEIL3Q8TAT5 605 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 TMEM54Q969K7 222 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 OR8B4Q96RC9 309 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 DEFB127Q9H1M4 99 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 GALNT8Q9NY28 637 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 SSUH2Q9Y2M2 353 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 FLVCR1Q9Y5Y0 555 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 HSPB2A8KAH6 182 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 TMCC2O75069 709 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 SOX6P35712 828 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 GDI2P50395 445 aaKnown RBP19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ROM1Q03395 351 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 EIF2B1Q14232 305 aaKnown RBP19.16■□□□□ 0.66
USP6NL-204ENST00000606752 HSPB2Q16082 182 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF404Q494X3 552 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 KCTD18Q6PI47 426 aaPredicted RBP19.16■□□□□ 0.66
USP6NL-204ENST00000606752 FCRLAQ7L513 359 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ABHD4Q8TB40 342 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 C11orf40Q8WZ69 217 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 RNF166Q96A37 237 aaPredicted RBP19.16■□□□□ 0.66
USP6NL-204ENST00000606752 PNPLA2Q96AD5 504 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 ABHD6Q9BV23 337 aa19.16■□□□□ 0.66
USP6NL-204ENST00000606752 KCNN2Q9H2S1 579 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms