RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 C5orf42Q9H799 3197 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 F8VVB4 439 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 F8VWA3 439 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 HOXA2O43364 376 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 DNAJB6O75190 326 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 GLCEO94923 617 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 PCCBP05166 539 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 ELNP15502 786 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 ZBTB25P24278 435 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 EMDP50402 254 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 RAB28P51157 221 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 EXOSC7Q15024 291 aaKnown RBP11.27□□□□□ -0.6
CDCA3-212ENST00000604599 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 LYG2Q86SG7 212 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 RAB42Q8N4Z0 105 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 C15orf54Q8N8G6 183 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 OR2G2Q8NGZ5 317 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 ZCCHC10Q8TBK6 192 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 INSM2Q96T92 566 aaPredicted RBP11.27□□□□□ -0.6
CDCA3-212ENST00000604599 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 RPS10P5Q9NQ39 176 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 LPAR3Q9UBY5 353 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 TMED7Q9Y3B3 224 aa11.27□□□□□ -0.6
CDCA3-212ENST00000604599 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 A6NLC8 198 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 OR52A4PA6NMU1 304 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 C9JQL5 133 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 TGM5O43548 720 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 LDB3O75112 727 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 FBP1P09467 338 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 ZNF888P0CJ79 500 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-212ENST00000604599 SELPP16109 830 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 CD80P33681 288 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 RNF212Q495C1 297 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 ETFBKMTQ8IXQ9 262 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 GPR148Q8TDV2 347 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 ZNF426Q9BUY5 554 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 SPHK2Q9NRA0 654 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 TMEM74BQ9NUR3 256 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
CDCA3-212ENST00000604599 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.61
CDCA3-212ENST00000604599 TRBV5-7A0A0A0MS05 114 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 TMEM235A6NFC5 223 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 LRRC72A6NJI9 287 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 C1QTNF3-AMACRE9PGA6 284 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 H7C1C5 153 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 WRBO00258 174 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 KLK3P07288 261 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CD14P08571 375 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 GABRA3P34903 492 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 SCAND1P57086 179 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 LCN6P62502 163 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ADAM8P78325 824 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 EIF2B1Q14232 305 aaKnown RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 OR2B11Q5JQS5 317 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 SLC35D3Q5M8T2 416 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 NECAB3Q96P71 396 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 PHB2Q99623 299 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 NMNAT2Q9BZQ4 307 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 SRA1Q9HD15 236 aaKnown RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CYTL1Q9NRR1 136 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 KLK13Q9UKR3 277 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 WNT6Q9Y6F9 365 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 TEX13DA0A0J9YY54 714 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 hCG_1809904A0A1W2PP81 198 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 A0A1W2PR64 198 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 A0A1W2PRV1 198 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 C9orf170A2RU37 121 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ZNF860A6NHJ4 632 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 NUDT19A8MXV4 375 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ABHD16AO95870 558 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CRHP06850 196 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 AKR1C4P17516 323 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 PSMB6P28072 239 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ADH6P28332 368 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CAV2P51636 162 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 KIRREL2Q6UWL6 708 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ABHD13Q7L211 337 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 WDSUB1Q8N9V3 476 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ZSCAN4Q8NAM6 433 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 NUDCD2Q8WVJ2 157 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 ROBO4Q8WZ75 1007 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 MRPL38Q96DV4 380 aaKnown RBP11.26□□□□□ -0.61
CDCA3-212ENST00000604599 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 LRFN5Q96NI6 719 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 PFDN5Q99471 154 aa11.26□□□□□ -0.61
CDCA3-212ENST00000604599 EDEM2Q9BV94 578 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms