RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 USF3Q68DE3 2245 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 TRBV4-1A0A0J9YWV2 114 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 C12orf71A8MTZ7 269 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SLC2A10O95528 541 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SNAP29O95721 258 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 APEHP13798 732 aaKnown RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SLC25A16P16260 332 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SDHAP31040 664 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 APLNRP35414 380 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 THBS4P35443 961 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 MSX2P35548 267 aaPredicted RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 GLRXP35754 106 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 RAD52P43351 418 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 LIMS1P48059 325 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 ERVK-25P63136 954 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SGCAQ16586 387 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 FAM98BQ52LJ0 330 aaKnown RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 FAM27BQ5VT28 67 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 KRT80Q6KB66 452 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SLC25A47Q6Q0C1 308 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SMARCD3Q6STE5 483 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 MYPOPQ86VE0 399 aaPredicted RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 IGFN1Q86VF2 1251 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 C1orf174Q8IYL3 243 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 ALDH16A1Q8IZ83 802 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 LRRC18Q8N456 261 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 NEU4Q8WWR8 484 aaPredicted RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 FAM168AQ92567 244 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 VRK1Q99986 396 aaPredicted RBP9.99□□□□□ -0.81
CCDC12-209ENST00000604164 REG4Q9BYZ8 158 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SEC61A2Q9H9S3 476 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 DYNLRB1Q9NP97 96 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 FAM53CQ9NYF3 392 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 SIGLEC7Q9Y286 467 aa9.99□□□□□ -0.81
CCDC12-209ENST00000604164 ALPK2Q86TB3 2170 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 PRSS37A4D1T9 235 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 NDUFS8O00217 210 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 IMPA2O14732 288 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 OR10H3O60404 316 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 PTP4A3O75365 173 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 DIRAS1O95057 198 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 TP53P04637 393 aaPredicted RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 CST2P09228 141 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 MSR1P21757 451 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FUT4P22083 530 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FPR3P25089 353 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 PCSK6P29122 969 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 RRM2P31350 389 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 SLC6A6P31641 620 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FMODQ06828 376 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 KRR1Q13601 381 aaKnown RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FHL1Q13642 323 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 GK3PQ14409 553 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 MOGQ16653 247 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 IQCCQ4KMZ1 466 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 DNAL1Q4LDG9 190 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 LCN8Q6JVE9 175 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 RPL13AP3Q6NVV1 102 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 DNM1P34Q6PK57 102 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 ARL9Q6T311 187 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 CYP2R1Q6VVX0 501 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 DNM1P46Q6ZS02 220 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 TRPM8Q7Z2W7 1104 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 SYT9Q86SS6 491 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 MEX3DQ86XN8 651 aaKnown RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF540Q8NDQ6 660 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 OR10H5Q8NGA6 315 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FANK1Q8TC84 345 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 GNPDA2Q8TDQ7 276 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 MRPL24Q96A35 216 aaKnown RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 ASB9Q96DX5 294 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 FUZQ9BT04 418 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 BCL2L14Q9BZR8 327 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 MS4A5Q9H3V2 200 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 GSX1Q9H4S2 264 aaPredicted RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 NRIP3Q9NQ35 241 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 EIF3KQ9UBQ5 218 aaKnown RBP9.98□□□□□ -0.81
CCDC12-209ENST00000604164 UGT2A1Q9Y4X1 527 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
CCDC12-209ENST00000604164 TEX13CA0A0J9YWL9 993 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 A0A1W2PPL8 197 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 M0R233 179 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 SYNGR3O43761 229 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 IDH3BO43837 385 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 NDUFS7O75251 213 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
CCDC12-209ENST00000604164 PATE4P0C8F1 98 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 CRABP1P29762 137 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 CDAP32320 146 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 PDLIM4P50479 330 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 HMGA2P52926 109 aa9.97□□□□□ -0.81
CCDC12-209ENST00000604164 TRAP1Q12931 704 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms