RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	EVX1	P49640	407 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	IDH3G	P51553	393 aa	Predicted RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	RAP1B	P61224	184 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	RAB1A	P62820	205 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	RAP1A	P62834	184 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	TSPAN31	Q12999	210 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	GK3P	Q14409	553 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	KCNMB1	Q16558	191 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	ZNF362	Q5T0B9	420 aa	Predicted RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	GPR139	Q6DWJ6	353 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	PGBD2	Q6P3X8	592 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	DPY19L2P2	Q6ZN68	376 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	PTCHD4	Q6ZW05	846 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	DHFR2	Q86XF0	187 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	AQP12A	Q8IXF9	295 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	ADGRG5	Q8IZF4	528 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	CDK20	Q8IZL9	346 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	PAPD5	Q8NDF8	572 aa	Known RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	OR10H5	Q8NGA6	315 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	GTPBP3	Q969Y2	492 aa	Known RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	FBXO17	Q96EF6	278 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	MS4A3	Q96HJ5	214 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	RSRC1	Q96IZ7	334 aa	Known RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628		Q96M85	177 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SNX18	Q96RF0	628 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	DOK1	Q99704	481 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SMR3A	Q99954	134 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SH3GL3	Q99963	347 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	PLK3	Q9H4B4	646 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	IL20	Q9NYY1	176 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	POU2F3	Q9UKI9	436 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	FBXL3	Q9UKT7	428 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	FAM32A	Q9Y421	112 aa	Known RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	ABCA2	Q9BZC7	2435 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	TEX13C	A0A0J9YWL9	993 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ARRDC5	A6NEK1	342 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	GSC2	O15499	205 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CST2	P09228	141 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	PATE4	P0C8F1	98 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	RAP2A	P10114	183 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	HOXB6	P17509	224 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	NPR2	P20594	1047 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	PCSK6	P29122	969 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ACVR1B	P36896	505 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CDKN1A	P38936	164 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CDKN2A	P42771	156 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	PTDSS1	P48651	473 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CLRN1	P58418	232 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ERVK-25	P63136	954 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	MXRA7	P84157	204 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	MYBPC1	Q00872	1141 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	KRTAP1-1	Q07627	177 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ENDOG	Q14249	297 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	RFX4	Q33E94	735 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	FGD3	Q5JSP0	725 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	SMARCD3	Q6STE5	483 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CD300LD	Q6UXZ3	194 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ZNF620	Q6ZNG0	422 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	SYT9	Q86SS6	491 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ADCK1	Q86TW2	530 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	IGFN1	Q86VF2	1251 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	FBXL14	Q8N1E6	418 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	PAQR4	Q8N4S7	273 aa	Predicted RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	LINC00471	Q8N535	108 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CPEB3	Q8NE35	698 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	OR52J3	Q8NH60	311 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	NANOS1	Q8WY41	292 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	HTRA1	Q92743	480 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	RBP7	Q96R05	134 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	WAC	Q9BTA9	647 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CACNG6	Q9BXT2	260 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	DGCR6L	Q9BY27	220 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	CADM1	Q9BY67	442 aa	Known RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	GDF2	Q9UK05	429 aa	Predicted RBP	7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	ATP23	Q9Y6H3	246 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628		V9GYQ6	96 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	HIVEP2	P31629	2446 aa		7.58	□□□□□ -1.2
SSBP4-208	ENST00000600628	IGLV3-9	A0A075B6K5	115 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	LOC100509620	A0A075B734	347 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	IGLV1-36	A0A0B4J1U3	117 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	UNC119B	A6NIH7	251 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	FAM171A2	A8MVW0	826 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628		B9A039	149 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	DCTN6	O00399	190 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	BHLHE40	O14503	412 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	IDH3B	O43837	385 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	FARS2	O95363	451 aa	Known RBP	7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	OR4A8	P0C604	315 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	CD79A	P11912	226 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	ZNF250	P15622	560 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	CTLA4	P16410	223 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	CDA	P32320	146 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	THBS4	P35443	961 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	GLRX	P35754	106 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	SERPINF1	P36955	418 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	PPOX	P50336	477 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	FABP6	P51161	128 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	ZNF84	P51523	738 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	HIST1H3A	P68431	136 aa		7.57	□□□□□ -1.2
SSBP4-208	ENST00000600628	SPIB	Q01892	262 aa		7.57	□□□□□ -1.2

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