RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 IMPAD1Q9NX62 359 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 DIDO1Q9BTC0 2240 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 PRODHO43272 600 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 GYPBP06028 91 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 GNAO1P09471 354 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 CLUP10909 449 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 LAP3P28838 519 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 PYCR1P32322 319 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 HSPA13P48723 471 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 ISL1P61371 349 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 SORDQ00796 357 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 TSC22D1Q15714 1073 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 KCNMB1Q16558 191 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 FAM27BQ5VT28 67 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 NXNL2Q5VZ03 156 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 OR7E24Q6IFN5 339 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 ANKRD16Q6P6B7 361 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 BCDIN3DQ7Z5W3 292 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 C17orf78Q8N4C9 275 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 APOL4Q9BPW4 351 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 MOKQ9UQ07 419 aa11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 HELZ2Q9BYK8 2649 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-206ENST00000600118 CIB4A0PJX0 185 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 CCDC182A6NF36 153 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 FAM171A2A8MVW0 826 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 MPZL2O60487 215 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 RAD51DO75771 328 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SEC14L2O76054 403 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 GLCEO94923 617 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 GPANK1O95872 356 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 TFP02787 698 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SCG5P05408 212 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 B4GALT1P15291 398 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 NPR2P20594 1047 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 IL32P24001 234 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 CDAP32320 146 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 CENPAP49450 140 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 GLO1Q04760 184 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 OCLNQ16625 522 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC35D3Q5M8T2 416 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC22A24Q8N4F4 322 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 ACBD4Q8NC06 268 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 STEAP2Q8NFT2 490 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 OR51L1Q8NGJ5 315 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 HTRA1Q92743 480 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 LRRC46Q96FV0 321 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF184Q99676 751 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 OR51V1Q9H2C8 321 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 RERGLQ9H628 205 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 MARCH7Q9H992 704 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 MRPL22Q9NWU5 206 aaKnown RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF224Q9NZL3 707 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 KLF2Q9Y5W3 355 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 HSPE1-MOB4S4R3N1 261 aa11.08□□□□□ -0.64
CHMP2A-206ENST00000600118 A0A096LPE4 126 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 ARPC4-TTLL3A0A0A6YYG9 625 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 A0A1W2PPL8 197 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 A0A1W2PPZ6 126 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 WBP4O75554 376 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 MPZL1O95297 269 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 HRGP04196 525 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 OR8G3PP0DMU2 310 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 IGFBP2P18065 325 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 BLVRAP53004 296 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 HSF2Q03933 536 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 APOFQ13790 326 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 ENDOGQ14249 297 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 MAD2L1BPQ15013 274 aaPredicted RBP11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 HIKESHIQ53FT3 197 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 C1QTNF12Q5T7M4 302 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 MEDAGQ5VYS4 303 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 C22orf34Q6ZV56 151 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 P2RY8Q86VZ1 359 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 GID4Q8IVV7 300 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 WDR31Q8NA23 367 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms