RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	HNRNPA0	Q13151	305 aa	Known RBP	12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	KPNB1	Q14974	876 aa	Known RBP	12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	NKPD1	Q17RQ9	610 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	AVPI1	Q5T686	147 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	PGM2L1	Q6PCE3	622 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	THSD4	Q6ZMP0	1018 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	ZNF566	Q969W8	418 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	SLC25A44	Q96H78	314 aa	Predicted RBP	12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	ZNF347	Q96SE7	839 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	PRSS27	Q9BQR3	290 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	OCEL1	Q9H607	264 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	MEPE	Q9NQ76	525 aa	Predicted RBP	12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	TAAR3P	Q9P1P4	343 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	CACNG2	Q9Y698	323 aa		12.53	□□□□□ -0.4
IRF3-223	ENST00000599223	C17orf100	A8MU93	164 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223		M0QX08	132 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	DHH	O43323	396 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	RNF13	O43567	381 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	OR6A2	O95222	327 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	ATP6V1G2	O95670	118 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	QDPR	P09417	244 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	OR8G3P	P0DMU2	310 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF250	P15622	560 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	PCMT1	P22061	227 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	CFP	P27918	469 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	CCL8	P80075	99 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	MYBPC1	Q00872	1141 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	RBBP4	Q09028	425 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	FLOT2	Q14254	428 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	UGT2A3	Q6UWM9	527 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	NOXO1	Q8NFA2	376 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	LRGUK	Q96M69	825 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	SEPHS2	Q99611	448 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	CGREF1	Q99674	301 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	PCDHAC1	Q9H158	963 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	MUC13	Q9H3R2	512 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	G6PC2	Q9NQR9	355 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	NANS	Q9NR45	359 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	METRN	Q9UJH8	293 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF229	Q9UJW7	825 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	FBXL3	Q9UKT7	428 aa		12.52	□□□□□ -0.41
IRF3-223	ENST00000599223	LOC105371242	A0A075B767	164 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	TRAPPC13	A5PLN9	417 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	FKBP6	O75344	327 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	DEAF1	O75398	565 aa	Predicted RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	SNAP29	O95721	258 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	MMP7	P09237	267 aa	Predicted RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	TNFRSF1B	P20333	461 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	PCGF2	P35227	344 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	TMEM33	P57088	247 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	KLF3	P57682	345 aa	Predicted RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	ACTR3	P61158	418 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	RPL18	Q07020	188 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	TRAP1	Q12931	704 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	HIST3H3	Q16695	136 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	NANOGNB	Q7Z5D8	188 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	OR8J3	Q8NGG0	315 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	OR51F2	Q8NH61	342 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	PFN4	Q8NHR9	129 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	MCHR2	Q969V1	340 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	ASB9	Q96DX5	294 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	KCTD14	Q9BQ13	255 aa	Predicted RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF416	Q9BWM5	594 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	KAT8	Q9H7Z6	458 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	DCLRE1B	Q9H816	532 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	EVA1A	Q9H8M9	152 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	CDH20	Q9HBT6	801 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	HINT3	Q9NQE9	182 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF346	Q9UL40	294 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	POMP	Q9Y244	141 aa		12.51	□□□□□ -0.41
IRF3-223	ENST00000599223	IGKV1D-43	A0A0B4J1Z2	117 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	SLC2A10	O95528	541 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	IGHG1	P01857	330 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	F13B	P05160	661 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	LCK	P06239	509 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	UMPS	P11172	480 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	GZMM	P51124	257 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	UGT2B15	P54855	530 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	MVK	Q03426	396 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	TRIM25	Q14258	630 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	C8orf82	Q6P1X6	216 aa	Predicted RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	SHQ1	Q6PI26	577 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	TTC33	Q6PID6	262 aa	Predicted RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	SYT14	Q8NB59	555 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	ICA1L	Q8NDH6	482 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	CPEB3	Q8NE35	698 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	SYNPR	Q8TBG9	265 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	ASB10	Q8WXI3	467 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	RSRC1	Q96IZ7	334 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	ECSIT	Q9BQ95	431 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	MRPL13	Q9BYD1	178 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	PLA2G12A	Q9BZM1	189 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF665	Q9H7R5	613 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	C20orf141	Q9NUB4	165 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	ABCD2	Q9UBJ2	740 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	GRIP1	Q9Y3R0	1128 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	UGT2A1	Q9Y4X1	527 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	MGAM2	Q2M2H8	2515 aa		12.5	□□□□□ -0.41
IRF3-223	ENST00000599223	TRAV20	A0A0B4J274	112 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms