RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TTYH2Q9BSA4 534 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 SP140LQ9H930 580 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 MRPS18BQ9Y676 258 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 A0A087WZY1 265 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ZNF879B4DU55 563 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ARL6IP5O75915 188 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 TNFSF15O95150 251 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ELK1P19419 428 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 APEX1P27695 318 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 BLVRAP53004 296 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 GLO1Q04760 184 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 P2RY14Q15391 338 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 YIF1BQ5BJH7 314 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 TIGD3Q6B0B8 471 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 SPATC1Q76KD6 591 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 GDPD3Q7L5L3 318 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ESX1Q8N693 406 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 OR2G2Q8NGZ5 317 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ACOT12Q8WYK0 555 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 NSMAFQ92636 917 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 OR8B4Q96RC9 309 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 PPP1R3EQ9H7J1 279 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 ELOVL3Q9HB03 270 aa15.23■□□□□ 0.03
SHKBP1-216ENST00000598201 A0A1W2PQ09 198 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 OR4C45A6NMZ5 311 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 TERTO14746 1132 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 PHYHO14832 338 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 PAHP00439 452 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 SERPINA7P05543 415 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 CSF3P09919 207 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 DLSTP36957 453 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 DNASE1L1P49184 302 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 DSCR4P56555 118 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 CDC20Q12834 499 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 HSD17B12Q53GQ0 312 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 PYDC2Q56P42 97 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 ACER2Q5QJU3 275 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 TMEM164Q5U3C3 297 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC18B1Q6NT16 456 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 TRILQ7L0X0 811 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 PRSS35Q8N3Z0 413 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 ADPRHL1Q8NDY3 354 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC26A10Q8NG04 563 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 OR5AK2Q8NH90 309 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 PSMF1Q92530 271 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 TMEM165Q9HC07 324 aa15.22■□□□□ 0.03
SHKBP1-216ENST00000598201 TRABD2BA6NFA1 517 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 PTTG1O95997 202 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC17A1Q14916 467 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 FAM205BPQ63HN1 556 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 GPAT4Q86UL3 456 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 ZNF227Q86WZ6 799 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 UEVLDQ8IX04 471 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 RDH10Q8IZV5 341 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 C17orf50Q8WW18 174 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 SGCZQ96LD1 299 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 DERL3Q96Q80 235 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 ABHD6Q9BV23 337 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 KLHL13Q9P2N7 655 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 MSRB2Q9Y3D2 182 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 AK6Q9Y3D8 172 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 HDGFL3Q9Y3E1 203 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 A0A0B4J203 849 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 SULT2B1O00204 365 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 TRAF3IP2O43734 574 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 ATF1P18846 271 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 RBMS1P29558 406 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 KIR3DL2P43630 455 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 DEFA1P59665 94 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 DEFA3P59666 94 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 EIF2B1Q14232 305 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 RAET1LQ5VY80 246 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 GDPD1Q8N9F7 314 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 OR10AC1Q8NH08 325 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 ASB17Q8WXJ9 295 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 KIAA1143Q96AT1 154 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 MIB2Q96AX9 1013 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 TMEM41AQ96HV5 264 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 GFI1Q99684 422 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 MRPL13Q9BYD1 178 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC25A18Q9H1K4 315 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 DKKL1Q9UK85 242 aa15.21■□□□□ 0.03
SHKBP1-216ENST00000598201 LOC101059948A0A1B0GTJ6 334 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 OR2M5A3KFT3 312 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 NOTOA8MTQ0 251 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 FAM25AB3EWG3 89 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 FAM25CB3EWG5 89 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 FAM25GB3EWG6 89 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 EIF4EP06730 217 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 EPXP11678 715 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 SRMP19623 302 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 ROM1Q03395 351 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 MRPL28Q13084 256 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 RTP5Q14D33 572 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 TAB1Q15750 504 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 ODF4Q2M2E3 257 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 WDR38Q5JTN6 314 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 TMPPEQ6ZT21 453 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms