RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	UMPS	P11172	480 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	ZNF32	P17041	273 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	AQP2	P41181	271 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	ZNF133	P52736	654 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	TBC1D28	Q2M2D7	210 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	TUSC1	Q2TAM9	212 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	PCGF3	Q3KNV8	242 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	SLC36A2	Q495M3	483 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	THEM4	Q5T1C6	240 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	RFPL4B	Q6ZWI9	263 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	DHDDS	Q86SQ9	333 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	HDAC2	Q92769	488 aa	Known RBP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	TAF15	Q92804	592 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	DVL3	Q92997	716 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	THOC1	Q96FV9	657 aa	Known RBP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	MARS2	Q96GW9	593 aa	Known RBP	12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	POM121L2	Q96KW2	1035 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	CGREF1	Q99674	301 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	PCDHAC1	Q9H158	963 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641	SLCO1C1	Q9NYB5	712 aa		12.84	□□□□□ -0.35
PRKD2-210	ENST00000597641		A0A0G2JMP0	313 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641		A0A0X1KG70	313 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	SLC22A23	A1A5C7	686 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	TRIM77	I1YAP6	450 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	UBOX5	O94941	541 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	FARS2	O95363	451 aa	Known RBP	12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	NGF	P01138	241 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	ACADS	P16219	412 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	CCNO	P22674	350 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	ATP4B	P51164	291 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	CLRN1	P58418	232 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	LCN2	P80188	198 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	CYP51A1	Q16850	503 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	C10orf128	Q5T292	105 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	ARMC4	Q5T2S8	1044 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	NANOGNB	Q7Z5D8	188 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	DPP10	Q8N608	796 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR4M2	Q8NGB6	313 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	SLC25A40	Q8TBP6	338 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	TMEM255B	Q8WV15	326 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	SNX33	Q8WV41	574 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	GEMIN6	Q8WXD5	167 aa	Known RBP	12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	C1orf147	Q96MC9	270 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	BCL2L14	Q9BZR8	327 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR2J1	Q9GZK6	312 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	KAT8	Q9H7Z6	458 aa	Known RBP	12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	SAP30L	Q9HAJ7	183 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	MMP26	Q9NRE1	261 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	CORO2B	Q9UQ03	480 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	PPIAL4A	Q9Y536	164 aa		12.83	□□□□□ -0.36
PRKD2-210	ENST00000597641	CLDN25	C9JDP6	229 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	TPD52L2	O43399	206 aa	Known RBP	12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	TSPAN19	P0C672	248 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	STOM	P27105	288 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	PCGF2	P35227	344 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	RAD52	P43351	418 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF81	P51508	661 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	SELENOV	P59797	346 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	UBA52	P62987	128 aa	Known RBP	12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	ERVK-25	P63136	954 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	PSG4	Q00888	419 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	LAPTM4A	Q15012	233 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	DCAF12L2	Q5VW00	463 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR10A6	Q8NH74	314 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	CCL17	Q92583	94 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	NSMAF	Q92636	917 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	RAB39B	Q96DA2	213 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	DUX5	Q96PT3	197 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	RBM4	Q9BWF3	364 aa	Known RBP	12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	POFUT1	Q9H488	388 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	C7orf69	Q9H7B7	122 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	EVA1A	Q9H8M9	152 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	NANOG	Q9H9S0	305 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	DECR2	Q9NUI1	292 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	KLHL21	Q9UJP4	597 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	LEF1	Q9UJU2	399 aa	Predicted RBP	12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	PCDHGB1	Q9Y5G3	927 aa		12.82	□□□□□ -0.36
PRKD2-210	ENST00000597641	IQCM	A0A1B0GVH7	501 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	PIP5K1C	O60331	668 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR7A10	O76100	309 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	PRSS23	O95084	383 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	MT-ND1	P03886	318 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	HIST1H2AB	P04908	130 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SCG5	P05408	212 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	ANPEP	P15144	967 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	APLNR	P35414	380 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SEC61A1	P61619	476 aa	Known RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	MRPS34	P82930	218 aa	Known RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	HSF2	Q03933	536 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	HFE	Q30201	348 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	NRN1L	Q496H8	165 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	KLF17	Q5JT82	389 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SLC25A47	Q6Q0C1	308 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	HIST3H2A	Q7L7L0	130 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	BCL6B	Q8N143	479 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	DEFB108B	Q8NET1	73 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR1J2	Q8NGS2	313 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	KLF14	Q8TD94	323 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	LRRC8C	Q8TDW0	803 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms