RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
TGFB1-202ENST00000597453 C20orf141Q9NUB4 165 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
TGFB1-202ENST00000597453 V9GYQ6 96 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 A0A1W2PRQ8 180 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 PIP5K1CO60331 668 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 UBL3O95164 117 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 RAB36O95755 333 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 THBS2P35442 1172 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 GLRXP35754 106 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 RIN1Q13671 783 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 DGCR6Q14129 220 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
TGFB1-202ENST00000597453 RAB39AQ14964 217 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 CR1LQ2VPA4 569 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 DNAL1Q4LDG9 190 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 LCN8Q6JVE9 175 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 LRP11Q86VZ4 500 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
TGFB1-202ENST00000597453 BPIFA2Q96DR5 249 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 ASB9Q96DX5 294 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 DHRS1Q96LJ7 313 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
TGFB1-202ENST00000597453 MYEF2Q9P2K5 600 aaKnown RBP13.03□□□□□ -0.32
TGFB1-202ENST00000597453 A0A087WUU8 490 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 M0R233 179 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 RNF13O43567 381 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 SYNGR3O43761 229 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 TSPAN19P0C672 248 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 IFI30P13284 250 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 FUT1P19526 365 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 APEX1P27695 318 aaKnown RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 ALDH3B1P43353 468 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 EVX1P49640 407 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 CHN2P52757 468 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 PRKCDQ05655 676 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 MAD2L1BPQ15013 274 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 ELFN2Q5R3F8 820 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 MBOAT2Q6ZWT7 520 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 PIWIL3Q7Z3Z3 882 aaKnown RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 DHFR2Q86XF0 187 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 NRMQ8IXM6 262 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 SLC22A24Q8N4F4 322 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 ZNF566Q969W8 418 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 MCUR1Q96AQ8 359 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 SLC7A6OSQ96CW6 309 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 DENND2DQ9H6A0 471 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-202ENST00000597453 IL1RAPQ9NPH3 570 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 FZR1Q9UM11 496 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.33
TGFB1-202ENST00000597453 GYG2O15488 501 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 HPXP02790 462 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 FABP3P05413 133 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 PGA4P0DJD7 388 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 PGA3P0DJD8 388 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 HNF1AP20823 631 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 GALK2Q01415 458 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 RPL18Q07020 188 aaKnown RBP13.01□□□□□ -0.33
TGFB1-202ENST00000597453 BNIP1Q12981 228 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 CCDC121Q6ZUS5 278 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 PAQR4Q8N4S7 273 aaPredicted RBP13.01□□□□□ -0.33
TGFB1-202ENST00000597453 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 HPS1Q92902 700 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 POP5Q969H6 163 aaKnown RBP13.01□□□□□ -0.33
TGFB1-202ENST00000597453 CCDC124Q96CT7 223 aaKnown RBP13.01□□□□□ -0.33
TGFB1-202ENST00000597453 SLC25A44Q96H78 314 aaPredicted RBP13.01□□□□□ -0.33
TGFB1-202ENST00000597453 CLPTM1LQ96KA5 538 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 TMEM38BQ9NVV0 291 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 HIF3AQ9Y2N7 669 aa13.01□□□□□ -0.33
TGFB1-202ENST00000597453 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 DHHO43323 396 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 DIRAS1O95057 198 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 SERPINA5P05154 406 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 MAKP20794 623 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 CDH15P55291 814 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 SMIM11AP58511 58 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 MS4A2Q01362 244 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 RUNX1T1Q06455 604 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 CCNIQ14094 377 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 ANKDD1AQ495B1 522 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 FGD3Q5JSP0 725 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 ZDHHC21Q8IVQ6 265 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 LINC01356Q8N9X3 169 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 OR4K5Q8NGD3 323 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 C1orf159Q96HA4 380 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 ZNF347Q96SE7 839 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 BTBD10Q9BSF8 475 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 FUZQ9BT04 418 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 C19orf24Q9BVV8 132 aa13□□□□□ -0.33
TGFB1-202ENST00000597453 MAGIXQ9H6Y5 334 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms