RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 NR4A1P22736 598 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 FPR3P25089 353 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 SDHAP31040 664 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 THBS4P35443 961 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 SERPINF1P36955 418 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 GSSP48637 474 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 EFNB3Q15768 340 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 DNAL1Q4LDG9 190 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 GPR139Q6DWJ6 353 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 TMEM53Q6P2H8 277 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 SMARCD3Q6STE5 483 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 DPY19L2P2Q6ZN68 376 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 DNM1P46Q6ZS02 220 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 CIARTQ8N365 385 aaPredicted RBP18.23■□□□□ 0.51
PNKP-209ENST00000596726 CCDC124Q96CT7 223 aaKnown RBP18.23■□□□□ 0.51
PNKP-209ENST00000596726 FBXO17Q96EF6 278 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 C18orf12Q96KH6 178 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 ZNF570Q96NI8 536 aa18.23■□□□□ 0.51
PNKP-209ENST00000596726 BARX1Q9HBU1 254 aaPredicted RBP18.23■□□□□ 0.51
PNKP-209ENST00000596726 SLC22A23A1A5C7 686 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 TRIM64A6NGJ6 449 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 TRIM64BA6NI03 449 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 H7C1C5 153 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 GYG2O15488 501 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 TXNDC12O95881 172 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 OR4A8P0C604 315 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 IFNGR2P38484 337 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 LCN6P62502 163 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 DAG1Q14118 895 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 CLEC12BQ2HXU8 276 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 FAM98BQ52LJ0 330 aaKnown RBP18.22■□□□□ 0.51
PNKP-209ENST00000596726 FAM27BQ5VT28 67 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 VHLLQ6RSH7 139 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 LRRC18Q8N456 261 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 OR4C15Q8NGM1 316 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 GNPDA2Q8TDQ7 276 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 RASD2Q96D21 266 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 BTBD10Q9BSF8 475 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 TRIM15Q9C019 465 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 RNF121Q9H920 327 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 IL20RAQ9UHF4 553 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 IER3IP1Q9Y5U9 82 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 PMF1-BGLAPU3KQ54 211 aa18.22■□□□□ 0.51
PNKP-209ENST00000596726 TEX13CA0A0J9YWL9 993 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 PRSS37A4D1T9 235 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 B9A039 149 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 TNFRSF11BO00300 401 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 XKRYO14609 159 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 BMP4P12644 408 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 APEHP13798 732 aaKnown RBP18.21■□□□□ 0.51
PNKP-209ENST00000596726 TSPAN31Q12999 210 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 SNTB2Q13425 540 aaKnown RBP18.21■□□□□ 0.51
PNKP-209ENST00000596726 KRR1Q13601 381 aaKnown RBP18.21■□□□□ 0.51
PNKP-209ENST00000596726 SGCAQ16586 387 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 RFX4Q33E94 735 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 KRT80Q6KB66 452 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 PGBD2Q6P3X8 592 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 COX4I2Q96KJ9 171 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 LRGUKQ96M69 825 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 PLK3Q9H4B4 646 aa18.21■□□□□ 0.51
PNKP-209ENST00000596726 TMEM129A0AVI4 362 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 AQP12BA6NM10 295 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 H7C1Q1 480 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 INHBBP09529 407 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 RPS6KA3P51812 740 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 BNIP1Q12981 228 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 RAB35Q15286 201 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 AQP12AQ8IXF9 295 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 LINC00471Q8N535 108 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 SLC30A7Q8NEW0 376 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 FANK1Q8TC84 345 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 KCNN2Q9H2S1 579 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 OR52D1Q9H346 318 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 C1orf198Q9H425 327 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 VSX1Q9NZR4 365 aaPredicted RBP18.2■□□□□ 0.5
PNKP-209ENST00000596726 SPEF1Q9Y4P9 236 aa18.2■□□□□ 0.5
PNKP-209ENST00000596726 CHD3Q12873 2000 aaKnown RBP18.2■□□□□ 0.5
PNKP-209ENST00000596726 ZANQ9Y493 2812 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 VSTM5A8MXK1 200 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 SOCS2O14508 198 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 IMPA2O14732 288 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 ARPC3O15145 178 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 STAMBPO95630 424 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 PTHP01270 115 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 SCG5P05408 212 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 CST2P09228 141 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 RAP2AP10114 183 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 ZNF32P17041 273 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 LAP3P28838 519 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 GLRXP35754 106 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 SNRPD2P62316 118 aaKnown RBP18.19■□□□□ 0.5
PNKP-209ENST00000596726 TNK1Q13470 666 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 MSMPQ1L6U9 139 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 OR2T5Q6IEZ7 315 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 ZNF770Q6IQ21 691 aaPredicted RBP18.19■□□□□ 0.5
PNKP-209ENST00000596726 PTCHD4Q6ZW05 846 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 ADCK1Q86TW2 530 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 ADGRG5Q8IZF4 528 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 OR2T29Q8NH02 315 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 DOK1Q99704 481 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms