RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 HILS1P60008 231 aa19.3■□□□□ 0.68
SSBP4-203ENST00000593641 TSTQ16762 297 aaKnown RBP19.3■□□□□ 0.68
SSBP4-203ENST00000593641 UNQ6126/PRO20091Q6UXV3 157 aa19.3■□□□□ 0.68
SSBP4-203ENST00000593641 GCDHQ92947 438 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-203ENST00000593641 PRSS27Q9BQR3 290 aa19.3■□□□□ 0.68
SSBP4-203ENST00000593641 INIPQ9NRY2 104 aa19.3■□□□□ 0.68
SSBP4-203ENST00000593641 WIPI2Q9Y4P8 454 aa19.3■□□□□ 0.68
SSBP4-203ENST00000593641 PLPP2O43688 288 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 TRMUO75648 421 aaKnown RBP19.29■□□□□ 0.68
SSBP4-203ENST00000593641 IGHV3-13P01766 116 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 FUT1P19526 365 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 STOMP27105 288 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 GCH1P30793 250 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 RBM34P42696 430 aaKnown RBP19.29■□□□□ 0.68
SSBP4-203ENST00000593641 ZNF81P51508 661 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 UGT2B15P54855 530 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 TAS2R41P59536 307 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 VMACQ2NL98 169 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 PABPC1L2AQ5JQF8 200 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 C10orf128Q5T292 105 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 C3orf56Q8N813 242 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 TSPEARQ8WU66 669 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 FAM216AQ8WUB2 273 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 STON2Q8WXE9 905 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 RAB1CQ92928 201 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 ZMYND19Q96E35 227 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-203ENST00000593641 ELMOD3Q96FG2 381 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 SEPHS2Q99611 448 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 RBM4Q9BWF3 364 aaKnown RBP19.29■□□□□ 0.68
SSBP4-203ENST00000593641 NANOGQ9H9S0 305 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 SIAEQ9HAT2 523 aa19.29■□□□□ 0.68
SSBP4-203ENST00000593641 EIF3KQ9UBQ5 218 aaKnown RBP19.29■□□□□ 0.68
SSBP4-203ENST00000593641 PLSCR5A0PG75 271 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 J3QLI3 93 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 OR7A10O76100 309 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 SLC2A10O95528 541 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 NR2C1P13056 603 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 AQP2P41181 271 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 COMPP49747 757 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 ZNF133P52736 654 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 ZNF718Q3SXZ3 478 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 FAM209AQ5JX71 171 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 DCAF12L2Q5VW00 463 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 C1orf229Q6ZS94 237 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 PEG10Q86TG7 708 aaKnown RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 CPEB3Q8NE35 698 aaKnown RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 PFN4Q8NHR9 129 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 GTF3AQ92664 365 aaKnown RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 SGTBQ96EQ0 304 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 THOC1Q96FV9 657 aaKnown RBP19.28■□□□□ 0.68
SSBP4-203ENST00000593641 ATP6V1G3Q96LB4 118 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 SUCNR1Q9BXA5 334 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 SH3GLB1Q9Y371 365 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 TANC2Q9HCD6 1990 aa19.28■□□□□ 0.68
SSBP4-203ENST00000593641 DEAF1O75398 565 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-203ENST00000593641 AVPP01185 164 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 IGHV2-5P01817 119 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 CDAP32320 146 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 LIMS1P48059 325 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 MRPS34P82930 218 aaKnown RBP19.27■□□□□ 0.68
SSBP4-203ENST00000593641 CD47Q08722 323 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 CCDC80Q76M96 950 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 C1QL2Q7Z5L3 287 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 TMEM255BQ8WV15 326 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 GAL3ST1Q99999 423 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 TMPRSS13Q9BYE2 586 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 POLR2J2Q9GZM3 115 aaKnown RBP19.27■□□□□ 0.68
SSBP4-203ENST00000593641 POLR2J3Q9H1A7 115 aaKnown RBP19.27■□□□□ 0.68
SSBP4-203ENST00000593641 SMURF2Q9HAU4 748 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 BAG5Q9UL15 447 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 CACNG2Q9Y698 323 aa19.27■□□□□ 0.68
SSBP4-203ENST00000593641 TMEM89A2RUT3 159 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 C5orf49A4QMS7 147 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 GMNCA6NCL1 334 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 SPRY3O43610 288 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 IGF2P01344 180 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 ZNF32P17041 273 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 GDI2P50395 445 aaKnown RBP19.26■□□□□ 0.67
SSBP4-203ENST00000593641 SPATA46Q5T0L3 261 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 NKAIN4Q8IVV8 208 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 NANPQ8TBE9 248 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 TMEM239Q8WW34 195 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 IPCEF1Q8WWN9 437 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-203ENST00000593641 CCL17Q92583 94 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 EGLN1Q9GZT9 426 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 C20orf141Q9NUB4 165 aa19.26■□□□□ 0.67
SSBP4-203ENST00000593641 INTS9Q9NV88 658 aaKnown RBP19.26■□□□□ 0.67
SSBP4-203ENST00000593641 ISPDA4D126 451 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 SPRY1O43609 319 aaPredicted RBP19.25■□□□□ 0.67
SSBP4-203ENST00000593641 OR5F1O95221 314 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 IGHV1-46P01743 117 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 GATA3P23771 443 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 ARFIP2P53365 341 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 CRYBA2P53672 197 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 SLC3A1Q07837 685 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 SGCAQ16586 387 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 THEM4Q5T1C6 240 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 ARMC4Q5T2S8 1044 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 ZNF101Q8IZC7 436 aa19.25■□□□□ 0.67
SSBP4-203ENST00000593641 BPIFB2Q8N4F0 458 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms