RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 YIPF5Q969M3 257 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 THOC1Q96FV9 657 aaKnown RBP16.12■□□□□ 0.17
CCDC43-205ENST00000592333 ZNF583Q96ND8 569 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 WACQ9BTA9 647 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 ALG12Q9BV10 488 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 TXNIPQ9H3M7 391 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-205ENST00000592333 HIF1ANQ9NWT6 349 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 CGGBP1Q9UFW8 167 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-205ENST00000592333 FZR1Q9UM11 496 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 HIF3AQ9Y2N7 669 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 AP3M1Q9Y2T2 418 aa16.12■□□□□ 0.17
CCDC43-205ENST00000592333 H3BSA7 217 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 FXYD1O00168 92 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 ICMTO60725 284 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 NCR1O76036 304 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 AQP2P41181 271 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 HSF2Q03933 536 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 ST3GAL3Q11203 375 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 RABL3Q5HYI8 236 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 THEM4Q5T1C6 240 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 FAM27BQ5VT28 67 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 FAM205BPQ63HN1 556 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 PCYOX1LQ8NBM8 494 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 TMEM255BQ8WV15 326 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 NMD3Q96D46 503 aaKnown RBP16.11■□□□□ 0.17
CCDC43-205ENST00000592333 CCNB1IP1Q9NPC3 277 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 GID8Q9NWU2 228 aa16.11■□□□□ 0.17
CCDC43-205ENST00000592333 CLPTM1O96005 669 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 TROVE2P10155 538 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC43-205ENST00000592333 DRD4P21917 467 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 STOMP27105 288 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 MAGEB1P43366 347 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 PIN1Q13526 163 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-205ENST00000592333 ZNF718Q3SXZ3 478 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 PABPC1L2AQ5JQF8 200 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 MEX3DQ86XN8 651 aaKnown RBP16.1■□□□□ 0.17
CCDC43-205ENST00000592333 ALDH16A1Q8IZ83 802 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 SYT14Q8NB59 555 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 CPEB3Q8NE35 698 aaKnown RBP16.1■□□□□ 0.17
CCDC43-205ENST00000592333 PFN4Q8NHR9 129 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 C10orf82Q8WW14 230 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 RAB39BQ96DA2 213 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 RBP7Q96R05 134 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 TMEM120AQ9BXJ8 343 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 CYSLTR2Q9NS75 346 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 C20orf141Q9NUB4 165 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 DECR2Q9NUI1 292 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 EIF3KQ9UBQ5 218 aaKnown RBP16.1■□□□□ 0.17
CCDC43-205ENST00000592333 ANK2Q01484 3957 aa16.1■□□□□ 0.17
CCDC43-205ENST00000592333 IGHV1-69-2A0A0G2JMI3 117 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 FAM220BPB1ANY3 271 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 FAM157AC9JC47 383 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 MRASO14807 208 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 SLC22A2O15244 555 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 IGHMP01871 453 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 ADH4P08319 380 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 CCL2P13500 99 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 TUBG1P23258 451 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 KDELR2P33947 212 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 GUCA1AP43080 201 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-205ENST00000592333 SELENOWP63302 87 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 CCL8P80075 99 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 ALG10Q5BKT4 473 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 ACSM5Q6NUN0 579 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 SYT9Q86SS6 491 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 LRRC18Q8N456 261 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 OR1J1Q8NGS3 322 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 LZICQ8WZA0 190 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 NABP1Q96AH0 204 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 POM121L2Q96KW2 1035 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 PRRC1Q96M27 445 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 LRRC37BQ96QE4 947 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 TUBG2Q9NRH3 451 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 UGT2A1Q9Y4X1 527 aa16.09■□□□□ 0.17
CCDC43-205ENST00000592333 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 ITGA2P17301 1181 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 GATA3P23771 443 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 GCH1P30793 250 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 RPL27P61353 136 aaKnown RBP16.08■□□□□ 0.16
CCDC43-205ENST00000592333 PCBD1P61457 104 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 KLF10Q13118 480 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 HFEQ30201 348 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 CYBRD1Q53TN4 286 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 MBNL2Q5VZF2 373 aaKnown RBP16.08■□□□□ 0.16
CCDC43-205ENST00000592333 SHQ1Q6PI26 577 aaKnown RBP16.08■□□□□ 0.16
CCDC43-205ENST00000592333 SLC25A47Q6Q0C1 308 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 USP43Q70EL4 1123 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 RNF113BQ8IZP6 322 aaKnown RBP16.08■□□□□ 0.16
CCDC43-205ENST00000592333 HDAC2Q92769 488 aaKnown RBP16.08■□□□□ 0.16
CCDC43-205ENST00000592333 BPIFA2Q96DR5 249 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 TIMD4Q96H15 378 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 TREM2Q9NZC2 230 aa16.08■□□□□ 0.16
CCDC43-205ENST00000592333 PLSCR5A0PG75 271 aa16.07■□□□□ 0.16
CCDC43-205ENST00000592333 A6NIZ1 184 aa16.07■□□□□ 0.16
CCDC43-205ENST00000592333 CLDN25C9JDP6 229 aa16.07■□□□□ 0.16
CCDC43-205ENST00000592333 J3QLI3 93 aa16.07■□□□□ 0.16
CCDC43-205ENST00000592333 PNPP00491 289 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms