RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SDHAP31040 664 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 TTKP33981 857 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 PTH2RP49190 550 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 FABP6P51161 128 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 ZNF84P51523 738 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 RAP1BP61224 184 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 RAP1AP62834 184 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 NKX6-1P78426 367 aaPredicted RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 CBX1P83916 185 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 TSPAN31Q12999 210 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 CLEC12AQ5QGZ9 265 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 DPY19L2P2Q6ZN68 376 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 ZNF620Q6ZNG0 422 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 HDDC2Q7Z4H3 204 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 FAM169BQ8N8A8 192 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 AQP11Q8NBQ7 271 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 TMEM171Q8WVE6 324 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 PIGTQ969N2 578 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 UTP4Q969X6 686 aaKnown RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 FBXO17Q96EF6 278 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 TSSK2Q96PF2 358 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 ERMAPQ96PL5 475 aaPredicted RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 RBP7Q96R05 134 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 TRIM15Q9C019 465 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 SYT4Q9H2B2 425 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 LRMDAQ9H2I8 198 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 FN3KQ9H479 309 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 RERGLQ9H628 205 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 DENND2DQ9H6A0 471 aaPredicted RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 REEP1Q9H902 201 aa9.98□□□□□ -0.81
VMP1-211ENST00000591315 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
VMP1-211ENST00000591315 A0A1W2PPL8 197 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 MGRN1O60291 552 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 SOX14O95416 240 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 STAMBPO95630 424 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 CST1P01037 141 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 CRYAAP02489 173 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 ZNF32P17041 273 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 PRKACGP22612 351 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 LAP3P28838 519 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 THBS4P35443 961 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 ARR3P36575 388 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 MRPS34P82930 218 aaKnown RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 CCNIQ14094 377 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 MICAQ29983 383 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 MST1LQ2TV78 715 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 C3orf36Q3SXR2 165 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 Q5PR19 223 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 THEM4Q5T1C6 240 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 SLC35F1Q5T1Q4 408 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 FAM205BPQ63HN1 556 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 C11orf71Q6IPW1 123 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 KRT80Q6KB66 452 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 SPNS3Q6ZMD2 512 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 SLC16A14Q7RTX9 510 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 CCDC36Q8IYA8 594 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 DEPDC4Q8N2C3 294 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 CPEB3Q8NE35 698 aaKnown RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 OR4K13Q8NH42 304 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 AKR7LQ8NHP1 331 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 NIPSNAP1Q9BPW8 284 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 IFT27Q9BW83 186 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 NUAK2Q9H093 628 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 RNF121Q9H920 327 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 SIAEQ9HAT2 523 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 KRCC1Q9NPI7 259 aaPredicted RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 ZNF701Q9NV72 531 aaPredicted RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 STX18Q9P2W9 335 aaKnown RBP9.97□□□□□ -0.81
VMP1-211ENST00000591315 EDARQ9UNE0 448 aa9.97□□□□□ -0.81
VMP1-211ENST00000591315 FAM171A2A8MVW0 826 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 XKRYO14609 159 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 GPRIN2O60269 458 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 SLC16A7O60669 478 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 TIPRLO75663 272 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 ATP5HO75947 161 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 UBL3O95164 117 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 RAB36O95755 333 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 TXNDC12O95881 172 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 ZNF35P13682 527 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 HIST1H1CP16403 213 aaKnown RBP9.96□□□□□ -0.82
VMP1-211ENST00000591315 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.82
VMP1-211ENST00000591315 SLC6A6P31641 620 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 IFNGR2P38484 337 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 ATP5J2P56134 94 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 SNTB2Q13425 540 aaKnown RBP9.96□□□□□ -0.82
VMP1-211ENST00000591315 ENDOGQ14249 297 aaKnown RBP9.96□□□□□ -0.82
VMP1-211ENST00000591315 PABPC1L2AQ5JQF8 200 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 C1QTNF12Q5T7M4 302 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 GPR139Q6DWJ6 353 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 ASRGL1Q7L266 308 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.96□□□□□ -0.82
VMP1-211ENST00000591315 FBXL14Q8N1E6 418 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 MUC15Q8N387 334 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 SDR9C7Q8NEX9 313 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 OR10G2Q8NGC3 310 aa9.96□□□□□ -0.82
VMP1-211ENST00000591315 OR4Q3Q8NH05 313 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms