RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	FGD3	Q5JSP0	725 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	HS3ST5	Q8IZT8	346 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	OR4C15	Q8NGM1	316 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	ZNF417	Q8TAU3	575 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	EME1	Q96AY2	570 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	SLC41A3	Q96GZ6	507 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	DHRS1	Q96LJ7	313 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	EPYC	Q99645	322 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	POLR2J2	Q9GZM3	115 aa	Known RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	POLR2J3	Q9H1A7	115 aa	Known RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	TMEM27	Q9HBJ8	222 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	CRNN	Q9UBG3	495 aa	Predicted RBP	11.44	□□□□□ -0.58
NPC1-212	ENST00000591107	RPS6KB2	Q9UBS0	482 aa		11.44	□□□□□ -0.58
NPC1-212	ENST00000591107		A0A1B0GWA3	101 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	TRAPPC13	A5PLN9	417 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	OR6C65	A6NJZ3	312 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107		G3V2T6	193 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	NDUFS8	O00217	210 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	RGS9	O75916	674 aa	Predicted RBP	11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	HPR	P00739	348 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	THY1	P04216	161 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	DAO	P14920	347 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	APEX1	P27695	318 aa	Known RBP	11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	GTF2E2	P29084	291 aa	Known RBP	11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	PPOX	P50336	477 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	SMIM11A	P58511	58 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	ST3GAL3	Q11203	375 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	TRAM2	Q15035	370 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	EFNB3	Q15768	340 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	ZNF613	Q6PF04	617 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	SHQ1	Q6PI26	577 aa	Known RBP	11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	C9orf16	Q9BUW7	83 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	GPR35	Q9HC97	309 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	DYNLRB1	Q9NP97	96 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	OBP2B	Q9NPH6	170 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	MAN2C1	Q9NTJ4	1040 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	SLC7A7	Q9UM01	511 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	FZR1	Q9UM11	496 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	RASD1	Q9Y272	281 aa		11.43	□□□□□ -0.58
NPC1-212	ENST00000591107	IGKV1D-42	A0A075B6H8	117 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107		A0A0B4J2E0	115 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TRBV4-1	A0A0J9YWV2	114 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107		A0A1B0GX12	115 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TMEM129	A0AVI4	362 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	LRRN3	E7EW58	273 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107		M0R3G1	203 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	SOCS2	O14508	198 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	EREG	O14944	169 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TRAF3IP2	O43734	574 aa	Predicted RBP	11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	SERPINI2	O75830	405 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	ZNF432	O94892	652 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	LYPD3	O95274	346 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	IGKV3-15	P01624	115 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	HLA-H	P01893	362 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	HLA-DOB	P13765	273 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	HNF1A	P20823	631 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	GRPR	P30550	384 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	VHL	P40337	213 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	LIMS1	P48059	325 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	ARHGDIA	P52565	204 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	GK3P	Q14409	553 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TBPL2	Q6SJ96	375 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	ZBTB49	Q6ZSB9	765 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	ZDHHC13	Q8IUH4	622 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	CBR4	Q8N4T8	237 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	LSMEM1	Q8N8F7	131 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TAAR8	Q969N4	342 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	EMC6	Q9BV81	110 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	VCX3B	Q9H321	246 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	LPAR2	Q9HBW0	351 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	CRLF2	Q9HC73	371 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	PDP1	Q9P0J1	537 aa	Predicted RBP	11.42	□□□□□ -0.58
NPC1-212	ENST00000591107	TMCC3	Q9ULS5	477 aa		11.42	□□□□□ -0.58
NPC1-212	ENST00000591107		A0A1W2PRQ8	180 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	EI24	O14681	340 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	CHP2	O43745	196 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	SLC43A1	O75387	559 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	CCNB2	O95067	398 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	ADRA2A	P08913	450 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	THRB	P10828	461 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	ZNF43	P17038	809 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	NPR2	P20594	1047 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	PRKACG	P22612	351 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	MAP2K6	P52564	334 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	HMGA2	P52926	109 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	DGCR6	Q14129	220 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	SEC23B	Q15437	767 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	ALG10B	Q5I7T1	473 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	ULK3	Q6PHR2	472 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	NKAIN4	Q8IVV8	208 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	TMEM123	Q8N131	208 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	GPR137C	Q8N3F9	429 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	GALNT4	Q8N4A0	578 aa		11.41	□□□□□ -0.58
NPC1-212	ENST00000591107	NUP37	Q8NFH4	326 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms