RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CGAP01215 116 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 HRGP04196 525 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 LAP3P28838 519 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 GUCA1AP43080 201 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 GABARAPL2P60520 117 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ROR2Q01974 943 aaKnown RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 HSF2Q03933 536 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 DBPQ10586 325 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 RAB40BQ12829 278 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 KCNMB1Q16558 191 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 VWA1Q6PCB0 445 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 LINGO2Q7L985 606 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 UBE2J2Q8N2K1 259 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF843Q8N446 348 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 RND1Q92730 232 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 GGHQ92820 318 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ZMYND19Q96E35 227 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ALKBH3Q96Q83 286 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 CNN2Q99439 309 aaKnown RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 PIGMQ9H3S5 423 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF629Q9UEG4 869 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 PROCRQ9UNN8 238 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 EXOGQ9Y2C4 368 aaKnown RBP13.37□□□□□ -0.27
DDX39A-211ENST00000590239 PCDHGB1Q9Y5G3 927 aa13.37□□□□□ -0.27
DDX39A-211ENST00000590239 A0A0G2JNJ9 132 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 TRIM64A6NGJ6 449 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 CCL21O00585 134 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■□□ 15.3
DDX39A-211ENST00000590239 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
DDX39A-211ENST00000590239 IGHV3-9P01782 118 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 GAAP10253 952 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 SH3BGRP55822 239 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-211ENST00000590239 SLC35A2P78381 396 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
DDX39A-211ENST00000590239 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 B3GLCTQ6Y288 498 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF540Q8NDQ6 660 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 LGALS12Q96DT0 336 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF696Q9H7X3 374 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 ADGRL4Q9HBW9 690 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 FGF20Q9NP95 211 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-211ENST00000590239 CCNB1IP1Q9NPC3 277 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 Q9UFV3 132 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 PRSS50Q9UI38 385 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 KCNG2Q9UJ96 466 aa13.36□□□□□ -0.27
DDX39A-211ENST00000590239 A0A1B0GUH1 482 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 PTGES3LE9PB15 166 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 MRPS14O60783 128 aaKnown RBP13.35□□□□□ -0.27
DDX39A-211ENST00000590239 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 TFP02787 698 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 SBK2P0C263 348 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 NPR2P20594 1047 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 MPGP29372 298 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 ST3GAL4Q11206 333 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 FAPQ12884 760 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 Q6ZT83 130 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 AHSA2Q719I0 299 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 SLC16A9Q7RTY1 509 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF837Q96EG3 531 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-211ENST00000590239 COPS4Q9BT78 406 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 POLE4Q9NR33 117 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 TMEM38BQ9NVV0 291 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 PAK1IP1Q9NWT1 392 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-211ENST00000590239 MRPL22Q9NWU5 206 aaKnown RBP13.35□□□□□ -0.27
DDX39A-211ENST00000590239 COMMD3-BMI1R4GMX3 469 aa13.35□□□□□ -0.27
DDX39A-211ENST00000590239 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-211ENST00000590239 J3QRE1 110 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 DVL2O14641 736 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 MSTNO14793 375 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 C1QL1O75973 258 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 PRB1P04280 392 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 CDK1P06493 297 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 LYNP07948 512 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 ZNF823P16415 610 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 MSR1P21757 451 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
DDX39A-211ENST00000590239 DCKP27707 260 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 CDAP32320 146 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 ENTPD1P49961 510 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 LSM6P62312 80 aaKnown RBP13.34□□□□□ -0.27
DDX39A-211ENST00000590239 P2RY6Q15077 328 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 TEX30Q5JUR7 227 aa13.34□□□□□ -0.27
DDX39A-211ENST00000590239 FAM27BQ5VT28 67 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms