RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CRB3Q9BUF7 120 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 SLC26A1Q9H2B4 701 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 EMC7Q9NPA0 242 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 CHST11Q9NPF2 352 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 KLRF1Q9NZS2 232 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 CDV3Q9UKY7 258 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ING4Q9UNL4 249 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 TRAV8-7A0A075B6U6 113 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 TTLL8A6PVC2 850 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ETV2O00321 342 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ZNF354AO60765 605 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 KHDRBS3O75525 346 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 HLA-BQ31612 363 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ZNF385CQ66K41 422 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 TMEM205Q6UW68 189 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 SERPINA12Q8IW75 414 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 MRGPRX4Q96LA9 322 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 ABHD6Q9BV23 337 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 PILRBQ9UKJ0 227 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 COA3Q9Y2R0 106 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 BOLA1Q9Y3E2 137 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 CACNA1EQ15878 2313 aa17.22■□□□□ 0.35
PRKCSH-209ENST00000589838 C2orf72A6NCS6 295 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 TMEM200CA6NKL6 621 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 CD2P06729 351 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 CDK2P24941 298 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 CCR6P51684 374 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 TLE3Q04726 772 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 FCN2Q15485 313 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 CLPPQ16740 277 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 SLC25A53Q5H9E4 307 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 ELFN2Q5R3F8 820 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 TSSK4Q6SA08 328 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 OR52N5Q8NH56 324 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 FOXN4Q96NZ1 517 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 ULBP3Q9BZM4 244 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 HRASLSQ9HDD0 168 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 SERINC1Q9NRX5 453 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 PLSCR3Q9NRY6 295 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 ALKBH4Q9NXW9 302 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 GTF2A1LQ9UNN4 478 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 B3GALT5Q9Y2C3 310 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 ADAMTS9Q9P2N4 1935 aa17.21■□□□□ 0.35
PRKCSH-209ENST00000589838 IGLV3-32A0A0A0MS00 114 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 PRAF2O60831 178 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 PTGS2P35354 604 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 ANGPT1Q15389 498 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 ETFDHQ16134 617 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 GSG1Q2KHT4 349 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 ODF4Q2M2E3 257 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 FGD2Q7Z6J4 655 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 WDR5BQ86VZ2 330 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 CATSPERDQ86XM0 798 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 OR10AC1Q8NH08 325 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 DEDD2Q8WXF8 326 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 PMEPA1Q969W9 287 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 PHF21AQ96BD5 680 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 C5orf34Q96MH7 638 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 MYOTQ9UBF9 498 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 CKLFQ9UBR5 152 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 DHDHQ9UQ10 334 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 RCE1Q9Y256 329 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 VDAC3Q9Y277 283 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 AQP8O94778 261 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 IFNGR1P15260 489 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 TAS2R20P59543 309 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 HSF1Q00613 529 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 FOXF1Q12946 379 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 MTFR2Q6P444 385 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 ARSKQ6UWY0 536 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 LUZP2Q86TE4 346 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 DNAAF1Q8NEP3 725 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 OR51A4Q8NGJ6 313 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 ARL5BQ96KC2 179 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 SPSB2Q99619 263 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 CMKLR1Q99788 373 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 RANBP3Q9H6Z4 567 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 METTL7AQ9H8H3 244 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 FANCFQ9NPI8 374 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 DIABLOQ9NR28 239 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 PTTG3PQ9NZH4 202 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 LRP12Q9Y561 859 aa17.2■□□□□ 0.34
PRKCSH-209ENST00000589838 TNRC6BQ9UPQ9 1833 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 ANKRD20A5PA0PJZ0 165 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 XRCC3O43542 346 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 GLSO94925 669 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 SYPP08247 313 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 ANXA3P12429 323 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 HLA-DOBP13765 273 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 PSMB1P20618 241 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 RAB11BQ15907 218 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 FAM69BQ5VUD6 431 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 OLFML2AQ68BL7 652 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 DEGS2Q6QHC5 323 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 SLC26A10Q8NG04 563 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 ATOH1Q92858 354 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 KCNK17Q96T54 332 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 TMEM165Q9HC07 324 aa17.19■□□□□ 0.34
PRKCSH-209ENST00000589838 SLC17A5Q9NRA2 495 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms