RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 MTERF1Q99551 399 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 C12orf57Q99622 126 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZNF649Q9BS31 505 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SPON2Q9BUD6 331 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FNDC11Q9BVV2 318 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 PINK1Q9BXM7 581 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 NKX6-2Q9C056 277 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 SAP130Q9H0E3 1048 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 METTL17Q9H7H0 456 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 EVA1AQ9H8M9 152 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 BCL2L10Q9HD36 194 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FANCFQ9NPI8 374 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MIEF1Q9NQG6 463 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 BIN3Q9NQY0 253 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MAN2C1Q9NTJ4 1040 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 TEX10Q9NXF1 929 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 TAS2R5Q9NYW4 299 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 PIPOXQ9P0Z9 390 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RHCGQ9UBD6 479 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FAM8A1Q9UBU6 413 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GPN3Q9UHW5 284 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 SPATA2Q9UM82 520 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RASD1Q9Y272 281 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CHST2Q9Y4C5 530 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SEC16AO15027 2179 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 UBE2QL1A1L167 161 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TRAPPC13A5PLN9 417 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PCP4L1A6NKN8 68 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 NUDT19A8MXV4 375 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TEX46H3BTG2 121 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 H7C2Y5 167 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 LINC01387J3KSC0 135 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TOX3O15405 576 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 KLF4O43474 513 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PLPP2O43688 288 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 FZD7O75084 574 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZNF254O75437 659 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 KHDRBS3O75525 346 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZNF821O75541 412 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 KLF7O75840 302 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ARL6IP5O75915 188 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 KRT33AO76009 404 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 NDUFB6O95139 128 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SNAPINO95295 136 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CD160O95971 181 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 HPP00738 406 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MT-ND4P03905 459 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 S100A8P05109 93 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RPLP1P05386 114 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 S100A6P06703 90 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 IL3P08700 152 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ACP5P13686 325 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RAB3BP20337 219 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PSMB1P20618 241 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 PAICSP22234 425 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 NFYAP23511 347 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 PAX6P26367 422 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 IMPA1P29218 277 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 FAUP35544 74 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 GDNFP39905 211 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CD79BP40259 229 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 VEGFCP49767 419 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MEOX2P50222 304 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CCR6P51684 374 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CCR8P51685 355 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SCAND1P57086 179 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SEC61A1P61619 476 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 PPP1CAP62136 330 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TBPL1P62380 186 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 DGCR2P98153 550 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MAT1AQ00266 395 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ACY1Q03154 408 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MADCAM1Q13477 382 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SLBPQ14493 270 aaKnown RBP eCLIP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZNF345Q14585 488 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 HLXQ14774 488 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 FBLN7Q53RD9 439 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 KRTCAP3Q53RY4 240 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PDSS1Q5T2R2 415 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 HIST2H2AA3Q6FI13 130 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TMEM211Q6ICI0 200 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ACSM5Q6NUN0 579 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RPL13AP3Q6NVV1 102 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 LPCAT3Q6P1A2 487 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 IL20RBQ6UXL0 311 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TMEM64Q6YI46 380 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 IL17RELQ6ZVW7 336 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TMUB2Q71RG4 321 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OVCH1Q7RTY7 1134 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZER1Q7Z7L7 766 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 NR2C2APQ86WQ0 139 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TMEM151BQ8IW70 566 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RNF113BQ8IZP6 322 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ARMC10Q8N2F6 343 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SLC43A2Q8N370 569 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TBC1D19Q8N5T2 526 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SIRT6Q8N6T7 355 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PXT1Q8NFP0 134 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 DMBX1Q8NFW5 382 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR2T33Q8NG76 320 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms