RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ZNF14P17017 642 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-207ENST00000588542 IDH3GP51553 393 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-207ENST00000588542 RAB1AP62820 205 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 COX10Q12887 443 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 KPNB1Q14974 876 aaKnown RBP17.56■□□□□ 0.4
DDX39A-207ENST00000588542 ATP6AP1Q15904 470 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 CLEC12AQ5QGZ9 265 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 SLC22A25Q6T423 547 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 B3GLCTQ6Y288 498 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 ZNF611Q8N823 705 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 IGFBPL1Q8WX77 278 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 NANOS1Q8WY41 292 aaKnown RBP17.56■□□□□ 0.4
DDX39A-207ENST00000588542 NINJ1Q92982 152 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 SYT4Q9H2B2 425 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 SIAEQ9HAT2 523 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 MOKQ9UQ07 419 aa17.56■□□□□ 0.4
DDX39A-207ENST00000588542 MAP1AP78559 2803 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-207ENST00000588542 RTTNQ86VV8 2226 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 CREBBPQ92793 2442 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 ENTPD5O75356 428 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
DDX39A-207ENST00000588542 SCG5P05408 212 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 NPR2P20594 1047 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 CALCRP30988 508 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 GIPRP48546 466 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 CDH11P55287 796 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 NAAAQ02083 359 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 NPRL3Q12980 569 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 SGCAQ16586 387 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 SHQ1Q6PI26 577 aaKnown RBP17.55■□□□□ 0.4
DDX39A-207ENST00000588542 C20orf204Q6ZNR8 217 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 LRRC18Q8N456 261 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 OR52L1Q8NGH7 329 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 OR4K13Q8NH42 304 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 LRTOMTQ8WZ04 291 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 NRBF2Q96F24 287 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 MS4A3Q96HJ5 214 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 SNX18Q96RF0 628 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 NUAK2Q9H093 628 aa17.55■□□□□ 0.4
DDX39A-207ENST00000588542 DENND2DQ9H6A0 471 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-207ENST00000588542 E7EQL1 145 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 ATP6V1G2-DDX39BF2Z307 99 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 DCTN6O00399 190 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 MGRN1O60291 552 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 MMP7P09237 267 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-207ENST00000588542 DNASE1P24855 282 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 FASP25445 335 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 PTDSS1P48651 473 aaKnown RBP17.54■□□□□ 0.4
DDX39A-207ENST00000588542 KEAP1Q14145 624 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 ZNF362Q5T0B9 420 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-207ENST00000588542 SLC35F1Q5T1Q4 408 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 FAM27BQ5VT28 67 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 LEG1Q6P5S2 330 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 SLC16A14Q7RTX9 510 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 ZNF584Q8IVC4 421 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 OR4Q3Q8NH05 313 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 FBXW5Q969U6 566 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 TSSK2Q96PF2 358 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 NMNAT3Q96T66 252 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 TSSK6Q9BXA6 273 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 TBC1D23Q9NUY8 699 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 CISD1Q9NZ45 108 aaKnown RBP17.54■□□□□ 0.4
DDX39A-207ENST00000588542 EDARQ9UNE0 448 aa17.54■□□□□ 0.4
DDX39A-207ENST00000588542 IGHV2OR16-5A0A0B4J2B6 119 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 A0A1W2PPL8 197 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 SLC16A7O60669 478 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 DANCRP0C864 163 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 NOS3P29474 1203 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 DBPQ10586 325 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-207ENST00000588542 RAB39AQ14964 217 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 PGGHGQ32M88 737 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 SLC36A3Q495N2 470 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 DPPA2Q7Z7J5 298 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 AMIGO2Q86SJ2 522 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 JAZF1Q86VZ6 243 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 LNX2Q8N448 690 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 NPEPL1Q8NDH3 523 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 SDR9C7Q8NEX9 313 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 OR5K1Q8NHB7 308 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 PYDC1Q8WXC3 89 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 MBD6Q96DN6 1003 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 FBXO17Q96EF6 278 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 FOXN4Q96NZ1 517 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 DDOQ99489 341 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 POLE4Q9NR33 117 aa17.53■□□□□ 0.4
DDX39A-207ENST00000588542 IGLV1-36A0A0B4J1U3 117 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 OR6C68A6NDL8 312 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 KHDRBS3O75525 346 aaKnown RBP17.52■□□□□ 0.4
DDX39A-207ENST00000588542 RAB36O95755 333 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 CRYAAP02489 173 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 FCGR1AP12314 374 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 ANXA8P13928 327 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 LAP3P28838 519 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX39A-207ENST00000588542 ENDOGQ14249 297 aaKnown RBP17.52■□□□□ 0.4
DDX39A-207ENST00000588542 SLC36A2Q495M3 483 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 FAHD1Q6P587 224 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 UGT2A3Q6UWM9 527 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 DEPDC4Q8N2C3 294 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 OR52E2Q8NGJ4 325 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms