RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CCDC80Q76M96 950 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 CPEB3Q8NE35 698 aaKnown RBP16.48■□□□□ 0.23
TRAF4-216ENST00000586813 TSPEARQ8WU66 669 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 NANOGQ9H9S0 305 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 SAP30LQ9HAJ7 183 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 INIPQ9NRY2 104 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 DECR2Q9NUI1 292 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 PCDHB10Q9UN67 800 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 CACNG2Q9Y698 323 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 A0A0G2JMP0 313 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 A0A0X1KG70 313 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 PLPP2O43688 288 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 MGRN1O60291 552 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 OR7A10O76100 309 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 SLC2A10O95528 541 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 FUT1P19526 365 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 STOMP27105 288 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 AQP2P41181 271 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 RBM34P42696 430 aaKnown RBP16.47■□□□□ 0.23
TRAF4-216ENST00000586813 HILS1P60008 231 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 MRPS34P82930 218 aaKnown RBP16.47■□□□□ 0.23
TRAF4-216ENST00000586813 MOGQ16653 247 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 TSTQ16762 297 aaKnown RBP16.47■□□□□ 0.23
TRAF4-216ENST00000586813 TTMPQ5BVD1 217 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 ARMC4Q5T2S8 1044 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 USP43Q70EL4 1123 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 NKAIN4Q8IVV8 208 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 OR4M2Q8NGB6 313 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 TMEM255BQ8WV15 326 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 NABP1Q96AH0 204 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 PLA2G12AQ9BZM1 189 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 SIAEQ9HAT2 523 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 CCNB1IP1Q9NPC3 277 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 C20orf141Q9NUB4 165 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 STX18Q9P2W9 335 aaKnown RBP16.47■□□□□ 0.23
TRAF4-216ENST00000586813 SH3GLB1Q9Y371 365 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 WIPI2Q9Y4P8 454 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 UGT2A1Q9Y4X1 527 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 WNK2Q9Y3S1 2297 aa16.47■□□□□ 0.23
TRAF4-216ENST00000586813 IGF2P01344 180 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 IGHV2-5P01817 119 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 TNFRSF1BP20333 461 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 CCNOP22674 350 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 CDAP32320 146 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 COMPP49747 757 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-216ENST00000586813 ZNF81P51508 661 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 TAS2R41P59536 307 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 HFEQ30201 348 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 ZNF101Q8IZC7 436 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 MOSPD2Q8NHP6 518 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 FAM216AQ8WUB2 273 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 NMD3Q96D46 503 aaKnown RBP16.46■□□□□ 0.23
TRAF4-216ENST00000586813 SGTBQ96EQ0 304 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 TIMD4Q96H15 378 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 KCNN2Q9H2S1 579 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 SMURF2Q9HAU4 748 aa16.46■□□□□ 0.23
TRAF4-216ENST00000586813 INTS9Q9NV88 658 aaKnown RBP16.46■□□□□ 0.23
TRAF4-216ENST00000586813 IGKV1D-43A0A0B4J1Z2 117 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 NPIPB13A6NJU9 1138 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 NPIPB4C9JG80 1138 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 TSPAN19P0C672 248 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 ZNF32P17041 273 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 WNT5AP41221 380 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 ARFIP2P53365 341 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 FMODQ06828 376 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 TMEM255AQ5JRV8 349 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 FAM209AQ5JX71 171 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 SPATA46Q5T0L3 261 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 C1QL2Q7Z5L3 287 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 PEG10Q86TG7 708 aaKnown RBP16.45■□□□□ 0.22
TRAF4-216ENST00000586813 TMEM239Q8WW34 195 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 IPCEF1Q8WWN9 437 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-216ENST00000586813 LIPHQ8WWY8 451 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 HDAC2Q92769 488 aaKnown RBP16.45■□□□□ 0.22
TRAF4-216ENST00000586813 ELMOD3Q96FG2 381 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 POM121L2Q96KW2 1035 aa16.45■□□□□ 0.22
TRAF4-216ENST00000586813 POLR2J2Q9GZM3 115 aaKnown RBP16.45■□□□□ 0.22
TRAF4-216ENST00000586813 POLR2J3Q9H1A7 115 aaKnown RBP16.45■□□□□ 0.22
TRAF4-216ENST00000586813 C5orf49A4QMS7 147 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 TRIM77I1YAP6 450 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 J3QLI3 93 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 SPRY3O43610 288 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 SHOX2O60902 331 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-216ENST00000586813 OR5F1O95221 314 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 IGHV1-46P01743 117 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 MAKP20794 623 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 GCH1P30793 250 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 MPV17P39210 176 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 MMP15P51511 669 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 CD47Q08722 323 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 PIN1Q13526 163 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-216ENST00000586813 ZNF718Q3SXZ3 478 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 RABL3Q5HYI8 236 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 NANOGP8Q6NSW7 305 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 NSMAFQ92636 917 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 RAB1CQ92928 201 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 MARS2Q96GW9 593 aaKnown RBP16.44■□□□□ 0.22
TRAF4-216ENST00000586813 MAGEB18Q96M61 343 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 JMJD8Q96S16 334 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms