RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ALPK2Q86TB3 2170 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 A0A096LPE4 126 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 IGLV1-36A0A0B4J1U3 117 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 PRSS44E7EML9 344 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 H0YAE9 185 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 DCTN6O00399 190 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 HLA-DQA2P01906 255 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 OR8G3PP0DMU2 310 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 B4GALT1P15291 398 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 PPP3CBP16298 524 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 CDAP32320 146 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 PYCR1P32322 319 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 HSPA13P48723 471 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 MRPS34P82930 218 aaKnown RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 GLO1Q04760 184 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 P2RY8Q86VZ1 359 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
VMP1-203ENST00000586245 PTP4A1Q93096 173 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 S100PBPQ96BU1 408 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 OR51V1Q9H2C8 321 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 NELFAQ9H3P2 528 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 SIAEQ9HAT2 523 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 NDRG3Q9UGV2 375 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 MOKQ9UQ07 419 aa11.95□□□□□ -0.5
VMP1-203ENST00000586245 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 PRODHO43272 600 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 MPZL2O60487 215 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 GYPBP06028 91 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 CLUP10909 449 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 MSR1P21757 451 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 FMO3P31513 532 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 CCKARP32238 428 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 CAPZA2P47755 286 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 BLVRAP53004 296 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
VMP1-203ENST00000586245 ADARB1P78563 741 aaKnown RBP11.94□□□□□ -0.5
VMP1-203ENST00000586245 EFNB1P98172 346 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 TBRG1Q3YBR2 411 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 SLC35D3Q5M8T2 416 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 TIMM23BQ5SRD1 257 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 FOXL2NBQ6ZUU3 175 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 SLC16A14Q7RTX9 510 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 SETD9Q8NE22 299 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 OR6K6Q8NGW6 343 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 FOXN4Q96NZ1 517 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 MED18Q9BUE0 208 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 HCAR1Q9BXC0 346 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
VMP1-203ENST00000586245 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 FLNCQ14315 2725 aa11.94□□□□□ -0.5
VMP1-203ENST00000586245 A1L4Q6 167 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 GLCEO94923 617 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 WNT11O96014 354 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 IL5RAQ01344 420 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 HSF2Q03933 536 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
VMP1-203ENST00000586245 IL18R1Q13478 541 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 APOFQ13790 326 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 DPPA2Q7Z7J5 298 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 C8orf59Q8N0T1 100 aaPredicted RBP11.93□□□□□ -0.5
VMP1-203ENST00000586245 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 BBS1Q8NFJ9 593 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 HTRA1Q92743 480 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 NABP1Q96AH0 204 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 SH3GL3Q99963 347 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
VMP1-203ENST00000586245 DOPEY1Q5JWR5 2465 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 SH3D21A4FU49 640 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms