RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 KRT73Q86Y46 540 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ARMC8Q8IUR7 673 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 PGAM4Q8N0Y7 254 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 LRRC18Q8N456 261 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZDHHC22Q8N966 263 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 CPEB3Q8NE35 698 aaKnown RBP9.89□□□□□ -0.83
LIG3-207ENST00000586119 VANGL1Q8TAA9 524 aaPredicted RBP9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZFAND2BQ8WV99 257 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 SLC6A7Q99884 636 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ECSITQ9BQ95 431 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZNF416Q9BWM5 594 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 C1orf21Q9H246 121 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 DENND2DQ9H6A0 471 aaPredicted RBP9.89□□□□□ -0.83
LIG3-207ENST00000586119 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 SPAG4Q9NPE6 437 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 IGKV1D-43A0A0B4J1Z2 117 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 B2RBV5 119 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 RNF13O43567 381 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SERPINB7O75635 380 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 UBOX5O94941 541 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 F13BP05160 661 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 MMP7P09237 267 aaPredicted RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 PGA4P0DJD7 388 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 PGA3P0DJD8 388 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 T-ENOLP0DO92 83 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 CDAP32320 146 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 MPV17P39210 176 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 CRYBB2P43320 205 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 GZMMP51124 257 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 KLF3P57682 345 aaPredicted RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 PCBP3P57721 371 aaKnown RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 MXRA7P84157 204 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 CYP51A1Q16850 503 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SPATA46Q5T0L3 261 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 TMEM154Q6P9G4 183 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SLC16A14Q7RTX9 510 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 CALHM3Q86XJ0 350 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SLC15A3Q8IY34 581 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 ARHGAP24Q8N264 748 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SYT14Q8NB59 555 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 C11orf65Q8NCR3 313 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 HIPK4Q8NE63 616 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 TAF15Q92804 592 aaKnown RBP eCLIP9.88□□□□□ -0.83
LIG3-207ENST00000586119 ZNF566Q969W8 418 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SLC25A44Q96H78 314 aaPredicted RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 ZNF607Q96SK3 696 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 MEPEQ9NQ76 525 aaPredicted RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 DCAF16Q9NXF7 216 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 ABCD2Q9UBJ2 740 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 OPN4Q9UHM6 478 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 SLC13A4Q9UKG4 626 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 ZNF346Q9UL40 294 aaKnown RBP9.88□□□□□ -0.83
LIG3-207ENST00000586119 SLC7A7Q9UM01 511 aa9.88□□□□□ -0.83
LIG3-207ENST00000586119 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 PRORSD1PA6NEY8 169 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 FAM220BPB1ANY3 271 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 BLOC1S5-TXNDC5H3BN57 136 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 TPD52L2O43399 206 aaKnown RBP9.87□□□□□ -0.83
LIG3-207ENST00000586119 SPRY3O43610 288 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 CHP2O43745 196 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 MT-ATP6P00846 226 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 IGHV2-5P01817 119 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 CCNOP22674 350 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 RASSF2P50749 326 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 SLC7A2P52569 658 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 LCN2P80188 198 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 BNIP1Q12981 228 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 VMACQ2NL98 169 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 AWAT1Q58HT5 328 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 RABL3Q5HYI8 236 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 THEM4Q5T1C6 240 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 INTS11Q5TA45 600 aaKnown RBP9.87□□□□□ -0.83
LIG3-207ENST00000586119 TMEM53Q6P2H8 277 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 TTC33Q6PID6 262 aaPredicted RBP9.87□□□□□ -0.83
LIG3-207ENST00000586119 C1QL2Q7Z5L3 287 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 RANBP3LQ86VV4 465 aaPredicted RBP9.87□□□□□ -0.83
LIG3-207ENST00000586119 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 OR1J1Q8NGS3 322 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 OR10A6Q8NH74 314 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 ZNF519Q8TB69 540 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 ADAMTS16Q8TE57 1224 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 C11orf40Q8WZ69 217 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 DUX5Q96PT3 197 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 PRSS27Q9BQR3 290 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 NANSQ9NR45 359 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 CMTM6Q9NX76 183 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 ANGPT4Q9Y264 503 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 PPIAL4AQ9Y536 164 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 PCDHGB1Q9Y5G3 927 aa9.87□□□□□ -0.83
LIG3-207ENST00000586119 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 LOC100509620A0A075B734 347 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 EBAG9O00559 213 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 MGRN1O60291 552 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 TRMUO75648 421 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 SLC2A10O95528 541 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms