RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ADAM8P78325 824 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 POU3F1Q03052 451 aaPredicted RBP10.1□□□□□ -0.79
LIG3-204ENST00000585740 ROM1Q03395 351 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 MYBPHQ13203 477 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 FAM27D1Q5T7N8 215 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TMEM164Q5U3C3 297 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 PYHIN1Q6K0P9 492 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 DEGS2Q6QHC5 323 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 UNQ6494/PRO21346Q6UXR6 183 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 PPP1R32Q7Z5V6 425 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NR2C2APQ86WQ0 139 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 CADM3Q8N126 398 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 Q8N402 240 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 ZNF676Q8N7Q3 588 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 WDSUB1Q8N9V3 476 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 OR13C5Q8NGS8 318 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 GPR148Q8TDV2 347 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 RNF128Q8TEB7 428 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 CT55Q8WUE5 264 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 ADAMTS14Q8WXS8 1223 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 DNAJA3Q96EY1 480 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TMEM41AQ96HV5 264 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TXNDC15Q96J42 360 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 MAP6Q96JE9 813 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 OXGR1Q96P68 337 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 DERL3Q96Q80 235 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NPAS1Q99742 590 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NEURL2Q9BR09 285 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 MRPL22Q9NWU5 206 aaKnown RBP10.1□□□□□ -0.79
LIG3-204ENST00000585740 NPAP1Q9NZP6 1156 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 KLHL13Q9P2N7 655 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 KCNG2Q9UJ96 466 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TCFL5Q9UL49 500 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 SPATA2Q9UM82 520 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 FREM3P0C091 2139 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 TEX51A0A1B0GUA7 166 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 LOC102725191A0A1B0GVB3 256 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR4C45A6NMZ5 311 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 GPR171O14626 319 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 TLX3O43711 291 aaPredicted RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 EFNA2O43921 213 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 PMS2P2O95744 297 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 CELA2AP08217 269 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 ZNF806P0C7X5 589 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 ELK1P19419 428 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 IL11P20809 199 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OTX2P32243 289 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 CD97P48960 835 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR10A3P58181 314 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 PITPNAQ00169 270 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 EIF2B1Q14232 305 aaKnown RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 SF3A2Q15428 464 aaKnown RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 CEP78Q5JTW2 689 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 THEM4Q5T1C6 240 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 KRT77Q7Z794 578 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 RAB43Q86YS6 212 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 ESX1Q8N693 406 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 SAMD12Q8N8I0 201 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR10H5Q8NGA6 315 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR1J4Q8NGS1 313 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR52N5Q8NH56 324 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 C4orf45Q96LM5 186 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 OR5B2Q96R09 309 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 KCNJ15Q99712 375 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 NAA11Q9BSU3 229 aaPredicted RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 ELOVL3Q9HB03 270 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 TCF7L1Q9HCS4 588 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 SLCO1C1Q9NYB5 712 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 FRRS1LQ9P0K9 344 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 DKKL1Q9UK85 242 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 FBXL2Q9UKC9 423 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 COA3Q9Y2R0 106 aaPredicted RBP10.09□□□□□ -0.79
LIG3-204ENST00000585740 PCDHGA1Q9Y5H4 931 aa10.09□□□□□ -0.79
LIG3-204ENST00000585740 TRBV5-7A0A0A0MS05 114 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 AQP7P3A6NL99 342 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 GJE1A6NN92 205 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 C21orf140B9A014 251 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 AIPO00170 330 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 PSMD9O00233 223 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 EIF1BO60739 113 aaKnown RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 CBR3O75828 277 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 MT-CO3P00414 261 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 IGHG1P01857 330 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 P04436 131 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 SERPINA7P05543 415 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 CALCBP10092 127 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 HLA-DOBP13765 273 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 LIFP15018 202 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 SPNP16150 400 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 ATF1P18846 271 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 DPP4P27487 766 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 PITPNBP48739 271 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 BIDP55957 195 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 SCAND1P57086 179 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 TAB1Q15750 504 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 MEP1BQ16820 701 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 PCK2Q16822 640 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 SLC25A35Q3KQZ1 300 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms