RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	STON2	Q8WXE9	905 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	NMD3	Q96D46	503 aa	Known RBP	13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	POM121L2	Q96KW2	1035 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ATP6V1G3	Q96LB4	118 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TMPRSS13	Q9BYE2	586 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	INIP	Q9NRY2	104 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	C20orf141	Q9NUB4	165 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	DECR2	Q9NUI1	292 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	RIMS3	Q9UJD0	308 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SH3GLB1	Q9Y371	365 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	WIPI2	Q9Y4P8	454 aa		13.92	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	LOC100509620	A0A075B734	347 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	IGKV1D-43	A0A0B4J1Z2	117 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TMEM89	A2RUT3	159 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MCIDAS	D6RGH6	385 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SLC2A10	O95528	541 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TSPAN19	P0C672	248 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TNFRSF1B	P20333	461 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	EPHA1	P21709	976 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	DRD4	P21917	467 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	CCNO	P22674	350 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	STOM	P27105	288 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	APLNR	P35414	380 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	WNT5A	P41221	380 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	COMP	P49747	757 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	HILS1	P60008	231 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MRPS34	P82930	218 aa	Known RBP	13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	HSF2	Q03933	536 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	GLO1	Q04760	184 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	PIN1	Q13526	163 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TTMP	Q5BVD1	217 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TMEM255A	Q5JRV8	349 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	THEM4	Q5T1C6	240 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	INTS11	Q5TA45	600 aa	Known RBP	13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	NANOGP8	Q6NSW7	305 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	NOXO1	Q8NFA2	376 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	FAM216A	Q8WUB2	273 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TMEM255B	Q8WV15	326 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	DYDC1	Q8WWB3	177 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	LIPH	Q8WWY8	451 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	NABP1	Q96AH0	204 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SGTB	Q96EQ0	304 aa		13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MARS2	Q96GW9	593 aa	Known RBP	13.91	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	FBP2	O00757	339 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TPD52L2	O43399	206 aa	Known RBP	13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SPRY3	O43610	288 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SHOX2	O60902	331 aa	Predicted RBP	13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	IGF2	P01344	180 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	IGHV1-46	P01743	117 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	IGHV2-5	P01817	119 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ZNF32	P17041	273 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MAK	P20794	623 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MPV17	P39210	176 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	RBM34	P42696	430 aa	Known RBP	13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ZNF81	P51508	661 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	MMP15	P51511	669 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ARFIP2	P53365	341 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	PSG4	Q00888	419 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SGCA	Q16586	387 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	HFE	Q30201	348 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ZNF718	Q3SXZ3	478 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SPATA46	Q5T0L3	261 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	SLC25A47	Q6Q0C1	308 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	CALHM3	Q86XJ0	350 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	ZNF101	Q8IZC7	436 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	AKR7L	Q8NHP1	331 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	TMEM239	Q8WW34	195 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	RASSF5	Q8WWW0	418 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	CCL17	Q92583	94 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	HDAC2	Q92769	488 aa	Known RBP	13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	RAB1C	Q92928	201 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	KCNN2	Q9H2S1	579 aa		13.9	□□□□□ -0.18
PRKAR1A-206	ENST00000585460	C5orf49	A4QMS7	147 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	CLDN25	C9JDP6	229 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	OR5F1	O95221	314 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	MT-ND5	P03915	603 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	DAP3	P51398	398 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	TAS2R41	P59536	307 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	ACTG1	P63261	375 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	FMOD	Q06828	376 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	CYLC2	Q14093	348 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	RABL3	Q5HYI8	236 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	FAM27B	Q5VT28	67 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	C1QL2	Q7Z5L3	287 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	TEX29	Q8N6K0	151 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	NSMAF	Q92636	917 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	GCDH	Q92947	438 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	RAB39B	Q96DA2	213 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	SAP30L	Q9HAJ7	183 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	SMURF2	Q9HAU4	748 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	CCNB1IP1	Q9NPC3	277 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	INTS9	Q9NV88	658 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	EIF3K	Q9UBQ5	218 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	KLHL21	Q9UJP4	597 aa		13.89	□□□□□ -0.19
PRKAR1A-206	ENST00000585460		A0A0G2JMP0	313 aa		13.88	□□□□□ -0.19
PRKAR1A-206	ENST00000585460		A0A0X1KG70	313 aa		13.88	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	TRIM77	I1YAP6	450 aa		13.88	□□□□□ -0.19
PRKAR1A-206	ENST00000585460		J3QLI3	93 aa		13.88	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	UBOX5	O94941	541 aa		13.88	□□□□□ -0.19
PRKAR1A-206	ENST00000585460	EGR1	P18146	543 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms