RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ADRA2AP08913 450 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 ITGA2P17301 1181 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 RHCEP18577 417 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 RAD52P43351 418 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 RASSF2P50749 326 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 MRPS34P82930 218 aaKnown RBP10.68□□□□□ -0.7
SS18-225ENST00000585121 TMEM249Q2WGJ8 235 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 IQCCQ4KMZ1 466 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 FGD3Q5JSP0 725 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 HDAC2Q92769 488 aaKnown RBP10.68□□□□□ -0.7
SS18-225ENST00000585121 NSL1Q96IY1 281 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 KCNK17Q96T54 332 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 MS4A5Q9H3V2 200 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 DCAF13Q9NV06 445 aaKnown RBP10.68□□□□□ -0.7
SS18-225ENST00000585121 NDE1Q9NXR1 346 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 GRHPRQ9UBQ7 328 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 TAGLN3Q9UI15 199 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 GPR160Q9UJ42 338 aa10.68□□□□□ -0.7
SS18-225ENST00000585121 ARFGEF3Q5TH69 2177 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 A0A096LNT2 108 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 A0A1W2PRQ8 180 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 A8MV72 311 aaPredicted RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 M0R233 179 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 XKRYO14609 159 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 CRLF1O75462 422 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 DAOP14920 347 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 TCN1P20061 433 aaPredicted RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 CDAP32320 146 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 NR4A2P43354 598 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 GPR4P46093 362 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 MNAT1P51948 309 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 SMIM11AP58511 58 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.7
SS18-225ENST00000585121 MXRA7P84157 204 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 VLDLRP98155 873 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 DGCR6Q14129 220 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 GGTLC2Q14390 218 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 ZBED5Q49AG3 693 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 SAMD4BQ5PRF9 694 aaKnown RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 RGS7BPQ6MZT1 257 aaPredicted RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 TBPL2Q6SJ96 375 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 C16orf89Q6UX73 402 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 UNQ6126/PRO20091Q6UXV3 157 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 TMPRSS11FQ6ZWK6 438 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 IGFN1Q86VF2 1251 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 MEX3DQ86XN8 651 aaKnown RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 RNF148Q8N7C7 305 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 OR13C2Q8NGS9 318 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 MCUR1Q96AQ8 359 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 SYT3Q9BQG1 590 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 MRPL37Q9BZE1 423 aaKnown RBP10.67□□□□□ -0.7
SS18-225ENST00000585121 BCL2L14Q9BZR8 327 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 GORASP2Q9H8Y8 452 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 REV1Q9UBZ9 1251 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 DUSP13Q9UII6 198 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 MAGEL2Q9UJ55 1249 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 AURKCQ9UQB9 309 aa10.67□□□□□ -0.7
SS18-225ENST00000585121 A0A1W2PPW3 197 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 PRSS23O95084 383 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 LCKP06239 509 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 T-ENOLP0DO92 83 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 CALB2P22676 271 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 GZMKP49863 264 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 PCBD1P61457 104 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 FXNQ16595 210 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 ZNF584Q8IVC4 421 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 ALDH16A1Q8IZ83 802 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 PGAM4Q8N0Y7 254 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 ZCCHC24Q8N2G6 241 aaKnown RBP10.66□□□□□ -0.7
SS18-225ENST00000585121 ARIH2OSQ8N7S6 290 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 SLC7A13Q8TCU3 470 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 UBASH3BQ8TF42 649 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 C11orf40Q8WZ69 217 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 TSPAN32Q96QS1 320 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
SS18-225ENST00000585121 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
SS18-225ENST00000585121 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.7
SS18-225ENST00000585121 AHCYL1O43865 530 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 STAMBPO95630 424 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 SNAP29O95721 258 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 CD14P08571 375 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 APEHP13798 732 aaKnown RBP10.65□□□□□ -0.7
SS18-225ENST00000585121 HSD17B1P14061 328 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FUT4P22083 530 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 CCNOP22674 350 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 UCP2P55851 309 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 ERVK-25P63136 954 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FMODQ06828 376 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 MOGQ16653 247 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 SPATS1Q496A3 300 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 PABPC1L2AQ5JQF8 200 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FAM27BQ5VT28 67 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 PODNL1Q6PEZ8 512 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms