RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 DUX4L9Q6RFH8 374 aaPredicted RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 UBALD2Q8IYN6 164 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 MS4A15Q8N5U1 240 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 B3GNT7Q8NFL0 401 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 OR7G2Q8NG99 324 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 RASD2Q96D21 266 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 PLIN2Q99541 437 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CHAC1Q9BUX1 264 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 PLA2G2FQ9BZM2 168 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CWH43Q9H720 699 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 METTL7AQ9H8H3 244 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 PSMC3IPQ9P2W1 217 aaPredicted RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 KIAA1257Q9ULG3 409 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CSDC2Q9Y534 153 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 PIKFYVEQ9Y2I7 2098 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 A0A1B0GVX0 72 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 MPHOSPH10O00566 681 aaKnown RBP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 SLC25A14O95258 325 aaPredicted RBP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 UTS2O95399 124 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 CTDNEP1O95476 244 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 FGGP02679 453 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 IGHV1-8P0DP01 117 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 PGAM1P18669 254 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 RAB3BP20337 219 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 CHMLP26374 656 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 TAGLN2P37802 199 aaKnown RBP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 YWHAGP61981 247 aaKnown RBP eCLIP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 TWF1Q12792 350 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 ECH1Q13011 328 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 ERCC8Q13216 396 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 SLAQ13239 276 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 IDI1Q13907 227 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 PTGES3Q15185 160 aaKnown RBP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 NANOGP8Q6NSW7 305 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 BIVMQ86UB2 503 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 PGAM4Q8N0Y7 254 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 EID2Q8N6I1 236 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 CYB561D1Q8N8Q1 229 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 HSD17B11Q8NBQ5 300 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 FBXL13Q8NEE6 735 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 OR10G2Q8NGC3 310 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 OR1S2Q8NGQ3 325 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 FAM3DQ96BQ1 224 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF578Q96N58 590 aaPredicted RBP2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 FAM49BQ9NUQ9 324 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 PSG8Q9UQ74 426 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 GOLT1BQ9Y3E0 138 aa2.32□□□□□ -2.04
PPP4R1-227ENST00000583988 IGHV5-10-1A0A0J9YXX1 117 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 B4GALT5O43286 388 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 GNAO1P09471 354 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF823P16415 610 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 AQP2P41181 271 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 NAA10P41227 235 aaPredicted RBP2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 CDKN2BP42772 138 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 NSG1P42857 185 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 CSNK1A1P48729 337 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 NUTF2P61970 127 aaKnown RBP2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 HMGN5P82970 282 aaKnown RBP2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 GINS1Q14691 196 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 SF3A2Q15428 464 aaKnown RBP2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 LINC00483Q53H64 154 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF836Q6ZNA1 936 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 OAFQ86UD1 273 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 FAM228AQ86W67 206 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 OR4C5Q8NGB2 326 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 OR10J6PQ8NGY7 276 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 OR5W2Q8NH69 310 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 CCDC126Q96EE4 140 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 CNDP1Q96KN2 507 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 HMG20AQ9NP66 347 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 PISDQ9UG56 409 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 ING4Q9UNL4 249 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 TMEM14AQ9Y6G1 99 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 PTPRTO14522 1441 aa2.31□□□□□ -2.04
PPP4R1-227ENST00000583988 TRBV11-1A0A0K0K1C0 115 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 HEATR9A2RTY3 570 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF716A6NP11 495 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 HIDE1A8MVS5 230 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 UBXN8O00124 270 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 WBP4O75554 376 aaKnown RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 SRP72O76094 671 aaKnown RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 SNX4O95219 450 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 AIFM1O95831 613 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 HLA-DPB1P04440 258 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 MRPL3P09001 348 aaKnown RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF735P0CB33 412 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF24P17028 368 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 WARSP23381 471 aaKnown RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 F2RP25116 425 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 OTX1P32242 354 aaPredicted RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 LRRC74AQ0VAA2 488 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 PGGHGQ32M88 737 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 SASS6Q6UVJ0 657 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 SLC22A9Q8IVM8 553 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 AKR7LQ8NHP1 331 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms