RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ARFIP2P53365 341 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ERVS71-1P61550 626 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RPS23P62266 143 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 MYBPC1Q00872 1141 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 MVKQ03426 396 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SCGB2A2Q13296 93 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RGNQ15493 299 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 NKPD1Q17RQ9 610 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 GLIPR1L2Q4G1C9 344 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ALG10BQ5I7T1 473 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 C6orf10Q5SRN2 563 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 REP15Q6BDI9 236 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RGS7BPQ6MZT1 257 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 C5orf46Q6UWT4 87 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ZNF627Q7L945 461 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ZNF584Q8IVC4 421 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 OR6N1Q8NGY5 312 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SGMS2Q8NHU3 365 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 BBS10Q8TAM1 723 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 FGFBP3Q8TAT2 258 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 MGARPQ8TDB4 240 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SLC35B4Q969S0 331 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 MUL1Q969V5 352 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SLC41A3Q96GZ6 507 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RSRC1Q96IZ7 334 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 MOGAT1Q96PD6 335 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SLC6A7Q99884 636 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 PAIP2Q9BPZ3 127 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 TMEM109Q9BVC6 243 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ZNF416Q9BWM5 594 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 OR51B6Q9H340 312 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ZNF665Q9H7R5 613 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 RMND5AQ9H871 391 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 BCL2L10Q9HD36 194 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 A4GALTQ9NPC4 353 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 B3GAT2Q9NPZ5 323 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 ASH2LQ9UBL3 628 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 SLC7A8Q9UHI5 535 aa6.65□□□□□ -1.34
SMCHD1-210ENST00000583800 LOC102725191A0A1B0GVB3 256 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 TRPC5OSA6NMA1 111 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF726A6NNF4 738 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 C5orf58C9J3I9 102 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 C11orf98E9PRG8 122 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 HDAC3O15379 428 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 TPST1O60507 370 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 UBL3O95164 117 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 MPZL1O95297 269 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 CCL2P13500 99 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 IDO1P14902 403 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 AHCYP23526 432 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 PRKAR1BP31321 381 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 CSNK1A1P48729 337 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 BIDP55957 195 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM33P57088 247 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 NCALDP61601 193 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 CCL8P80075 99 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 MRPS11P82912 194 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ROM1Q03395 351 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 PUDPQ08623 228 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 PMS2P3Q13401 168 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 AWAT1Q58HT5 328 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC2A7Q6PXP3 512 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 NHLRC1Q6VVB1 395 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 MSANTD1Q6ZTZ1 278 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 USP43Q70EL4 1123 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF771Q7L3S4 317 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 C1QL2Q7Z5L3 287 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 NET1Q7Z628 596 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 THAP5Q7Z6K1 395 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 MOGAT3Q86VF5 341 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 SKA3Q8IX90 412 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 C10orf111Q8N326 155 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 PAQR4Q8N4S7 273 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 LSMEM1Q8N8F7 131 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 SCAIQ8N9R8 606 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 HIPK4Q8NE63 616 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 NFKBIDQ8NI38 313 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 DNAJA4Q8WW22 397 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 GTF3AQ92664 365 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ITCHQ96J02 903 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 LRR1Q96L50 414 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 PAIP1Q9H074 479 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 CENPHQ9H3R5 247 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF385DQ9H6B1 395 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ESM1Q9NQ30 184 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 THUMPD1Q9NXG2 353 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 TAAR3PQ9P1P4 343 aa6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 TESQ9UGI8 421 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF346Q9UL40 294 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A0B4J2E0 115 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A0G2JMP0 313 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A0X1KG70 313 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A1B0GX12 115 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 C17orf100A8MU93 164 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CLIC1O00299 241 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 PLPP3O14495 311 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms