RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	OR7A17	O14581	309 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	STX16	O14662	325 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ANKRD28	O15084	1053 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ARPC2	O15144	300 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	TAPBP	O15533	448 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SCO2	O43819	266 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	MRPL33	O75394	65 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NDUFS3	O75489	264 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	RSL1D1	O76021	490 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	BRI3	O95415	125 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	OXT	P01178	125 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	FAM58BP	P0C7Q3	252 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	BMP2	P12643	396 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	HSD17B1	P14061	328 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NCF1	P14598	390 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF250	P15622	560 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NCK1	P16333	377 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SFTPD	P35247	375 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	VDAC2	P45880	294 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	RPL5	P46777	297 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CLCN7	P51798	805 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	PLA2G16	P53816	162 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	UBE2N	P61088	152 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	STX1B	P61266	288 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP6V0D1	P61421	351 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF45	Q02386	682 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CSTF3	Q12996	717 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP6AP1	Q15904	470 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	RABL3	Q5HYI8	236 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	C9orf135	Q5VTT2	229 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	METTL11B	Q5VVY1	283 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	LCN8	Q6JVE9	175 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	OGFOD2	Q6N063	350 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	LETMD1	Q6P1Q0	360 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	AGTRAP	Q6RW13	159 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	PAQR6	Q6TCH4	344 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	DHFR2	Q86XF0	187 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CPNE9	Q8IYJ1	553 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	MYO1H	Q8N1T3	1032 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	MIER2	Q8N344	545 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC26A10	Q8NG04	563 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	OR1K1	Q8NGR3	316 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	STAG3L4	Q8TBR4	150 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC5A11	Q8WWX8	675 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	VPS33A	Q96AX1	596 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ROPN1L	Q96C74	230 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	TUBGCP3	Q96CW5	907 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	LINGO1	Q96FE5	620 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	KCNC2	Q96PR1	638 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	OR4K3	Q96R72	315 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SIGLEC11	Q96RL6	698 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CIB1	Q99828	191 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	AIF1L	Q9BQI0	150 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CENPK	Q9BS16	269 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	C1orf50	Q9BV19	199 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF717	Q9BY31	904 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	MRPS26	Q9BYN8	205 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	PRSS22	Q9GZN4	317 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NELFA	Q9H3P2	528 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NOL11	Q9H8H0	719 aa	Known RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	HHATL	Q9HCP6	504 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SPAG4	Q9NPE6	437 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	C20orf141	Q9NUB4	165 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	ARMC1	Q9NVT9	282 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SLCO1C1	Q9NYB5	712 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	TAS2R13	Q9NYV9	303 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SLAMF8	Q9P0V8	285 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	TAAR3P	Q9P1P4	343 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	MIOX	Q9UGB7	285 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	BCAP29	Q9UHQ4	241 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	GPR55	Q9Y2T6	319 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NDUFAF1	Q9Y375	327 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	DHRS7	Q9Y394	339 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CCL27	Q9Y4X3	112 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SNX13	Q9Y5W8	968 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	CEPT1	Q9Y6K0	416 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	SMIM31	A0A1B0GVY4	71 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DHRS12	A0PJE2	317 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	AQP12B	A6NM10	295 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772		H3BNH8	94 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772		H3BSA7	217 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	UPK1A	O00322	258 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	AKAP10	O43572	662 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	UPK3A	O75631	287 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	TNFAIP8	O95379	198 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CLPTM1	O96005	669 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	PAH	P00439	452 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	MT-ND1	P03886	318 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CD55	P08174	381 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ELANE	P08246	267 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	GNAO1	P09471	354 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP6V1B1	P15313	513 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	RPS2	P15880	293 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CPN2	P22792	545 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	IL12B	P29460	328 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	EIF1	P41567	113 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	HSPA13	P48723	471 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	RPL23A	P62750	156 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	IRF8	Q02556	426 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms