RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 Q6ZR03 302 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 RNF165Q6ZSG1 346 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 C1orf122Q6ZSJ8 110 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ZCCHC23Q6ZST2 131 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 PIWIL3Q7Z3Z3 882 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 RIMKLAQ8IXN7 391 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 GALNT4Q8N4A0 578 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4S1Q8NGB4 309 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 KLF14Q8TD94 323 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ITLN1Q8WWA0 313 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 GATAD2BQ8WXI9 593 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TAAR8Q969N4 342 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 SAMD8Q96LT4 415 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM246Q9BRR3 403 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 DUSP26Q9BV47 211 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 OR2J1Q9GZK6 312 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 CYSLTR2Q9NS75 346 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 VPREB3Q9UKI3 123 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 EMCNQ9ULC0 261 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 CHST2Q9Y4C5 530 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 HUWE1Q7Z6Z7 4374 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 A0A096LPI6 279 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 MEGF11A6BM72 1044 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF879B4DU55 563 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 H3BQF6 201 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 HMGN4O00479 90 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 NPHS1O60500 1241 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 AGR2O95994 175 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 GSTA1P08263 222 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 MMP7P09237 267 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 NEFHP12036 1026 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 UQCRBP14927 111 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 CBLP22681 906 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 CPT2P23786 658 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 GTF2E2P29084 291 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 GABRA5P31644 462 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 ARRB2P32121 409 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 LIPAP38571 399 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 RPL3P39023 403 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 COX10Q12887 443 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 MAPK11Q15759 364 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 SMU1Q2TAY7 513 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 WDR25Q64LD2 544 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 LYPD2Q6UXB3 125 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF836Q6ZNA1 936 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 RFPL4BQ6ZWI9 263 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 H1FNTQ75WM6 255 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 KRT77Q7Z794 578 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 UEVLDQ8IX04 471 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 MIER2Q8N344 545 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 NATD1Q8N6N6 113 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 OR1J2Q8NGS2 313 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 OR6N1Q8NGY5 312 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 LRTOMTQ8WZ04 291 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM54Q969K7 222 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 R3HDM4Q96D70 268 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 CCDC126Q96EE4 140 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 TRIM15Q9C019 465 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 SIRPDQ9H106 197 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 DPAGT1Q9H3H5 408 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 C1orf198Q9H425 327 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 B3GAT2Q9NPZ5 323 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 ATAD3AQ9NVI7 634 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM38BQ9NVV0 291 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNRD1Q9P1U0 126 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 MIOXQ9UGB7 285 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 FIS1Q9Y3D6 152 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 DNAJC15Q9Y5T4 150 aa6.32□□□□□ -1.4
SMARCE1-217ENST00000580654 IGKV1D-42A0A075B6H8 117 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 LOC100509620A0A075B734 347 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 RNASEK-C17orf49H0YIS7 233 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 AZIN1O14977 448 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 TOX4O94842 621 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CYB5R3P00387 301 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CD28P10747 220 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 IL7RP16871 459 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CCNOP22674 350 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CRHR1P34998 444 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 RPL4P36578 427 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PITPNBP48739 271 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CAV1Q03135 178 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PSG7Q13046 419 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 UGT3A2Q3SY77 523 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF404Q494X3 552 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 XKR7Q5GH72 579 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 FAM201AQ5SY85 155 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 KANK2Q63ZY3 851 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4F3Q6IEY1 312 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM53Q6P2H8 277 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 LRFN4Q6PJG9 635 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 VRK2Q86Y07 508 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PDZD9Q8IXQ8 264 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms