RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZBED5Q49AG3 693 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 ZDHHC13Q8IUH4 622 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 FANK1Q8TC84 345 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 ZMYND19Q96E35 227 aaPredicted RBP16.8■□□□□ 0.28
LIMD2-209ENST00000580222 GPA33Q99795 319 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 DGCR6LQ9BY27 220 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 OCEL1Q9H607 264 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 TAS2R5Q9NYW4 299 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 B3GAT1Q9P2W7 334 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 NOX1Q9Y5S8 564 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 FLVCR1Q9Y5Y0 555 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF724A8MTY0 619 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 MS4A18H0YCH9 400 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 PRKACGP22612 351 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 PRPS1P60891 318 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 ZP4Q12836 540 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 MS4A18Q3C1V0 323 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 ALG10Q5BKT4 473 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 ATG16L2Q8NAA4 619 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 ANKK1Q8NFD2 765 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 MOSPD2Q8NHP6 518 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 FBXO17Q96EF6 278 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 FEVQ99581 238 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF556Q9HAH1 456 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 INIPQ9NRY2 104 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 OAZ3Q9UMX2 235 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 SIGLEC7Q9Y286 467 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 NOSIPQ9Y314 301 aaKnown RBP16.79■□□□□ 0.28
LIMD2-209ENST00000580222 PMF1-BGLAPU3KQ54 211 aa16.79■□□□□ 0.28
LIMD2-209ENST00000580222 TMEM89A2RUT3 159 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 AKAP8O43823 692 aaKnown RBP16.78■□□□□ 0.28
LIMD2-209ENST00000580222 RGS9O75916 674 aaPredicted RBP16.78■□□□□ 0.28
LIMD2-209ENST00000580222 NDUFB2O95178 105 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 F13BP05160 661 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 HLA-DOBP13765 273 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 ANXA8P13928 327 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 GSTM3P21266 225 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 NTF4P34130 210 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 CLDN17P56750 224 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 CASP12Q6UXS9 341 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 CREB3L2Q70SY1 520 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 GALNT5Q7Z7M9 940 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 NIPSNAP1Q9BPW8 284 aa16.78■□□□□ 0.28
LIMD2-209ENST00000580222 LOC102725191A0A1B0GVB3 256 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 LOC390937A0A1W2PQ73 354 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 A0A1W2PRG6 482 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 MCIDASD6RGH6 385 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 TRAF3IP2O43734 574 aaPredicted RBP16.77■□□□□ 0.28
LIMD2-209ENST00000580222 TSPAN19P0C672 248 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 ANPEPP15144 967 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 APOBEC3AP31941 199 aaPredicted RBP16.77■□□□□ 0.28
LIMD2-209ENST00000580222 RPL4P36578 427 aaKnown RBP16.77■□□□□ 0.28
LIMD2-209ENST00000580222 ACTG1P63261 375 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 DEFA6Q01524 100 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 SMARCD3Q6STE5 483 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF620Q6ZNG0 422 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 PXKQ7Z7A4 578 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 IGFN1Q86VF2 1251 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 EPHX4Q8IUS5 362 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 WDR31Q8NA23 367 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 ZFAND2BQ8WV99 257 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF385AQ96PM9 386 aaKnown RBP16.77■□□□□ 0.28
LIMD2-209ENST00000580222 GABARAPL1Q9H0R8 117 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 OR52D1Q9H346 318 aa16.77■□□□□ 0.28
LIMD2-209ENST00000580222 CMYA5Q8N3K9 4069 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 VWFP04275 2813 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 MRPL33O75394 65 aaKnown RBP16.76■□□□□ 0.27
LIMD2-209ENST00000580222 SOX14O95416 240 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 CTXN1P60606 82 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 TOP3AQ13472 1001 aaPredicted RBP16.76■□□□□ 0.27
LIMD2-209ENST00000580222 FHL1Q13642 323 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 MELKQ14680 651 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 NIPAL3Q6P499 406 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 KLHL17Q6TDP4 642 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 RASSF6Q6ZTQ3 369 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 SLC35D2Q76EJ3 337 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 AAED1Q7RTV5 226 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 OR52L1Q8NGH7 329 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 DNAJC9Q8WXX5 260 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 GCDHQ92947 438 aaPredicted RBP16.76■□□□□ 0.27
LIMD2-209ENST00000580222 TMEM45BQ96B21 275 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 CIB1Q99828 191 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 DCLRE1BQ9H816 532 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 MED29Q9NX70 200 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 IL20RAQ9UHF4 553 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 METRNQ9UJH8 293 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 RRP15Q9Y3B9 282 aaKnown RBP16.76■□□□□ 0.27
LIMD2-209ENST00000580222 CDH10Q9Y6N8 788 aa16.76■□□□□ 0.27
LIMD2-209ENST00000580222 ATP6V1G2-DDX39BF2Z307 99 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 LILRA1O75019 489 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 PTP4A3O75365 173 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 BMP4P12644 408 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 IFNGR1P15260 489 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 SLC6A6P31641 620 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 DAP3P51398 398 aaKnown RBP16.75■□□□□ 0.27
LIMD2-209ENST00000580222 COX10Q12887 443 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 GABRA6Q16445 453 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 PRR31Q5SQ13 230 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 RPL13AP3Q6NVV1 102 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 FAHD1Q6P587 224 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms