RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ZMAT1Q5H9K5 638 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 ARL9Q6T311 187 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 C10orf111Q8N326 155 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 PAQR4Q8N4S7 273 aaPredicted RBP15.24■□□□□ 0.03
MKS1-209ENST00000580127 LRRC17Q8N6Y2 441 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 DIRC2Q96SL1 478 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 WFDC6Q9BQY6 131 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 TMPRSS13Q9BYE2 586 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 CGGBP1Q9UFW8 167 aaPredicted RBP15.24■□□□□ 0.03
MKS1-209ENST00000580127 ZDHHC8Q9ULC8 765 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 TRIM33Q9UPN9 1127 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 NDUFAF1Q9Y375 327 aa15.24■□□□□ 0.03
MKS1-209ENST00000580127 KPNA4O00629 521 aaPredicted RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 ANGPT2O15123 496 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 ERLIN1O75477 346 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 ASAH2BP0C7U1 165 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 ACADSP16219 412 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 GDI2P50395 445 aaKnown RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 PCBP3P57721 371 aaKnown RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 MRPS34P82930 218 aaKnown RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 PABPC1L2AQ5JQF8 200 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 DLEU7Q6UYE1 221 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 C1orf229Q6ZS94 237 aaPredicted RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 ZER1Q7Z7L7 766 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 SYT14Q8NB59 555 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 VANGL1Q8TAA9 524 aaPredicted RBP15.23■□□□□ 0.03
MKS1-209ENST00000580127 TSPAN32Q96QS1 320 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 GPA33Q99795 319 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 IKZF5Q9H5V7 419 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 INIPQ9NRY2 104 aa15.23■□□□□ 0.03
MKS1-209ENST00000580127 ISPDA4D126 451 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 SPRY3O43610 288 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 DEAF1O75398 565 aaPredicted RBP15.22■□□□□ 0.03
MKS1-209ENST00000580127 FOXH1O75593 365 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 AVPP01185 164 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 FUT1P19526 365 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 ARHGDIAP52565 204 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 ERVS71-1P61550 626 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 SGCAQ16586 387 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 FNDC8Q8TC99 324 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 RBP7Q96R05 134 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 ZNF347Q96SE7 839 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 SLC6A7Q99884 636 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 CPPED1Q9BRF8 314 aaPredicted RBP15.22■□□□□ 0.03
MKS1-209ENST00000580127 MRPL13Q9BYD1 178 aaKnown RBP15.22■□□□□ 0.03
MKS1-209ENST00000580127 SMURF2Q9HAU4 748 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 ELOVL3Q9HB03 270 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 TMBIM4Q9HC24 238 aa15.22■□□□□ 0.03
MKS1-209ENST00000580127 PPIAL4EA0A075B759 164 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 PPIAL4CA0A0B4J2A2 164 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 C5orf49A4QMS7 147 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 PPIAL4DF5H284 164 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 PRSS23O95084 383 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 MT-ND1P03886 318 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 OPN1SWP03999 348 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 F13BP05160 661 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 MMP7P09237 267 aaPredicted RBP15.21■□□□□ 0.03
MKS1-209ENST00000580127 PPIAL4FP0DN26 164 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 RBM34P42696 430 aaKnown RBP15.21■□□□□ 0.03
MKS1-209ENST00000580127 PCBD1P61457 104 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 GLO1Q04760 184 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 THEM4Q5T1C6 240 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 C10orf128Q5T292 105 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 SHISA2Q6UWI4 295 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 DHDDSQ86SQ9 333 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 PTOV1Q86YD1 416 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 NOXO1Q8NFA2 376 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 CGREF1Q99674 301 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 EBF4Q9BQW3 602 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 PCDHAC1Q9H158 963 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 UBAP1Q9NZ09 502 aa15.21■□□□□ 0.03
MKS1-209ENST00000580127 HTR3EA5X5Y0 456 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 H3BSA7 217 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 WIPF1O43516 503 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 TRMUO75648 421 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 IGHV1-46P01743 117 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 ADRA2CP18825 462 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 TNFSF4P23510 183 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 UGT2B15P54855 530 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 RPL18Q07020 188 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 TAF11Q15544 211 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 AWAT1Q58HT5 328 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 MBNL2Q5VZF2 373 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 KLHL36Q8N4N3 616 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 DPP10Q8N608 796 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 GPR32P1Q8NGA4 272 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 TSPEARQ8WU66 669 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 DYDC1Q8WWB3 177 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 SGTBQ96EQ0 304 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 MARS2Q96GW9 593 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 SEPHS2Q99611 448 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 SH3GL1Q99961 368 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 ZNF426Q9BUY5 554 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 POLR2J2Q9GZM3 115 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 POLR2J3Q9H1A7 115 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 NANOGQ9H9S0 305 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 ZMAT3Q9HA38 289 aaKnown RBP15.2■□□□□ 0.02
MKS1-209ENST00000580127 BAG5Q9UL15 447 aa15.2■□□□□ 0.02
MKS1-209ENST00000580127 TIMM10BQ9Y5J6 103 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms