RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IER3IP1Q9Y5U9 82 aa5.69□□□□□ -1.5
TRAF4-213ENST00000578917 TLN2Q9Y4G6 2542 aa5.69□□□□□ -1.5
TRAF4-213ENST00000578917 TEX13CA0A0J9YWL9 993 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SLC22A23A1A5C7 686 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 PRSS37A4D1T9 235 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF503-AS2A6NEH8 195 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RNF223E7ERA6 249 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 H7C1C5 153 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SOCS2O14508 198 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 AHCYL1O43865 530 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SLC16A7O60669 478 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 NDUFS7O75251 213 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 PTP4A3O75365 173 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 UBOX5O94941 541 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CCNB2O95067 398 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RENP00797 406 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 IGLV1-44P01699 117 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 IGHV4-39P01824 125 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 TP53P04637 393 aaPredicted RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 LCKP06239 509 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 TSPAN19P0C672 248 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CCL2P13500 99 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 PAX1P15863 534 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ATP6V1B2P21281 511 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 NR4A1P22736 598 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 LAP3P28838 519 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CALCRP30988 508 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SDHAP31040 664 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SLC6A6P31641 620 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RAD52P43351 418 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 OMPP47874 163 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 GDI2P50395 445 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 EFNA4P52798 201 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 DSCR9P59020 149 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RPS23P62266 143 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 LCN6P62502 163 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 MRPS34P82930 218 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 HGFACQ04756 655 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 TNK1Q13470 666 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 FXNQ16595 210 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RFX4Q33E94 735 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 NRN1LQ496H8 165 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 GPR139Q6DWJ6 353 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ARL9Q6T311 187 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CLEC9AQ6UXN8 241 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 UNQ6126/PRO20091Q6UXV3 157 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 DPY19L2P2Q6ZN68 376 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 Q71RC1 249 aaPredicted RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 TSEN54Q7Z6J9 526 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 JAZF1Q86VZ6 243 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SPATA24Q86W54 205 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SVOPLQ8N434 492 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 LINC00471Q8N535 108 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CLDN22Q8N7P3 220 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 NUP37Q8NFH4 326 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 OR52L1Q8NGH7 329 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 FANK1Q8TC84 345 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 C11orf40Q8WZ69 217 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 HDAC2Q92769 488 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ASB9Q96DX5 294 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CLPTM1LQ96KA5 538 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 Q96M85 177 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 KCNK17Q96T54 332 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 BTBD10Q9BSF8 475 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 RAB1BQ9H0U4 201 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 OR51B6Q9H340 312 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 NOX3Q9HBY0 568 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SRA1Q9HD15 236 aaKnown RBP5.68□□□□□ -1.5
TRAF4-213ENST00000578917 GPR160Q9UJ42 338 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 SIGLEC7Q9Y286 467 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 FKBP7Q9Y680 259 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 U3KQV3 271 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 ZANQ9Y493 2812 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
TRAF4-213ENST00000578917 JMJD1CQ15652 2540 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 A0A1W2PPW3 197 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 C5orf49A4QMS7 147 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 H7C417 338 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 E2F6O75461 281 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 KHDRBS3O75525 346 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 DNAJC8O75937 253 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 PPP1R3DO95685 299 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 F12P00748 615 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CST1P01037 141 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 IGHMP01871 453 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 HLA-DQA2P01906 255 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MT-ND5P03915 603 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ADRA2AP08913 450 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CST2P09228 141 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 RAP2AP10114 183 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF35P13682 527 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF14P17017 642 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 HOXB6P17509 224 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MSR1P21757 451 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FPR3P25089 353 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 STOMP27105 288 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ARHGDIAP52565 204 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms