RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	NPHS2	Q9NP85	383 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HINT3	Q9NQE9	182 aa	Known RBP	3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SAR1A	Q9NR31	198 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NKIRAS2	Q9NYR9	191 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NKIRAS1	Q9NYS0	192 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TAAR3P	Q9P1P4	343 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DUSP13	Q9UII6	198 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RIMS3	Q9UJD0	308 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	METRN	Q9UJH8	293 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LEF1	Q9UJU2	399 aa	Predicted RBP	3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	POFUT2	Q9Y2G5	429 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HIF3A	Q9Y2N7	669 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329	WIPI2	Q9Y4P8	454 aa		3.76	□□□□□ -1.81
PPP4R1-209	ENST00000578329		A0A087WUU8	490 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329		A0A1B0GWJ7	208 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PRORSD1P	A6NEY8	169 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NPIPB13	A6NJU9	1138 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF726	A6NNF4	738 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329		B4DSR2	109 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	C5orf58	C9J3I9	102 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NPIPB4	C9JG80	1138 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MCIDAS	D6RGH6	385 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329		F5H0A9	414 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	C3orf80	F5H4A9	247 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	BLOC1S5-TXNDC5	H3BN57	136 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329		H7C1C5	153 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NME4	O00746	187 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TCF21	O43680	179 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PTP4A3	O75365	173 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	UBL3	O95164	117 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IGF2	P01344	180 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IGHV2-70	P01814	119 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR8G3P	P0DMU2	310 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	THRB	P10828	461 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CTLA4	P16410	223 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SELE	P16581	610 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPIB	P23284	216 aa	Known RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PAX7	P23759	505 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LAP3	P28838	519 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GPR6	P46095	362 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	YAP1	P46937	504 aa	Known RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CAPZA2	P47755	286 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LIMS1	P48059	325 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PRSS12	P56730	875 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMEM33	P57088	247 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LCN6	P62502	163 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ERVK-25	P63136	954 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HIST1H3A	P68431	136 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MVK	Q03426	396 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PSG7	Q13046	419 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CDK5R2	Q13319	367 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SEC23B	Q15437	767 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TST	Q16762	297 aa	Known RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TRMT5	Q32P41	509 aa	Known RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	KRTAP27-1	Q3LI81	207 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NRN1L	Q496H8	165 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CYBRD1	Q53TN4	286 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MEST	Q5EB52	335 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	THEM4	Q5T1C6	240 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HIST2H3PS2	Q5TEC6	136 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MBNL2	Q5VZF2	373 aa	Known RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	REP15	Q6BDI9	236 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF774	Q6NX45	483 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PTCHD4	Q6ZW05	846 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	USP51	Q70EK9	711 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HIST2H3A	Q71DI3	136 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	C1QL2	Q7Z5L3	287 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RANBP3L	Q86VV4	465 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC15A3	Q8IY34	581 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MICU2	Q8IYU8	434 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LRRC18	Q8N456	261 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IL17RD	Q8NFM7	739 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR13C2	Q8NGS9	318 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC25A40	Q8TBP6	338 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	KLF14	Q8TD94	323 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LRRC8C	Q8TDW0	803 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TSPEAR	Q8WU66	669 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMEM239	Q8WW34	195 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNRF4	Q8WWF5	429 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	C22orf15	Q8WYQ4	148 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF566	Q969W8	418 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MAGEB18	Q96M61	343 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF607	Q96SK3	696 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DDO	Q99489	341 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC6A7	Q99884	636 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SPATA5L1	Q9BVQ7	753 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMEM120A	Q9BXJ8	343 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC19A3	Q9BZV2	496 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR2H1	Q9GZK4	316 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR2J1	Q9GZK6	312 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TXNIP	Q9H3M7	391 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DENND2D	Q9H6A0	471 aa	Predicted RBP	3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF665	Q9H7R5	613 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SIAE	Q9HAT2	523 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MSL2	Q9HCI7	577 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DYNLRB1	Q9NP97	96 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	EMC7	Q9NPA0	242 aa		3.75	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NANS	Q9NR45	359 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms