RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 BRICD5Q6PL45 260 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 ARL9Q6T311 187 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 HIST3H2AQ7L7L0 130 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 HDDC2Q7Z4H3 204 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 RANBP3LQ86VV4 465 aaPredicted RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 ALDH16A1Q8IZ83 802 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 MUC20Q8N307 709 aaPredicted RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 PARP8Q8N3A8 854 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 KLF14Q8TD94 323 aaPredicted RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 GTF3AQ92664 365 aaKnown RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 HIST1H2ACQ93077 130 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 MARS2Q96GW9 593 aaKnown RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 SAMD8Q96LT4 415 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 MOGAT1Q96PD6 335 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 DCLRE1CQ96SD1 692 aaKnown RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 CITED1Q99966 193 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 SLC30A2Q9BRI3 323 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 RSPO3Q9BXY4 272 aaPredicted RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 HEATR1Q9H583 2144 aaKnown RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 SIAEQ9HAT2 523 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 CCNB1IP1Q9NPC3 277 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 NOX4Q9NPH5 578 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 SLC6A13Q9NSD5 602 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 TMEM106BQ9NUM4 274 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 PDP1Q9P0J1 537 aaPredicted RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 CLPSL1A2RUU4 121 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 WDR91A4D1P6 747 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 C5orf49A4QMS7 147 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TRPC5OSA6NMA1 111 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 C11orf98E9PRG8 122 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 IFNL4K9M1U5 179 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 HOXA3O43365 443 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 ZNF500O60304 480 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 FMO6PO60774 539 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TGDSO95455 350 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 GPANK1O95872 356 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 NGFP01138 241 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 MMP7P09237 267 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 PGA4P0DJD7 388 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 PGA3P0DJD8 388 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TUBG1P23258 451 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 OMGP23515 440 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 CD80P33681 288 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 MDH2P40926 338 aaKnown RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 GDI2P50395 445 aaKnown RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 ARHGDIAP52565 204 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 RGS8P57771 180 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 CLRN1P58418 232 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 RPL15P61313 204 aaKnown RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 BTG1P62324 171 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TNFAIP6P98066 277 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 MTX3Q5HYI7 312 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 PABPC1L2AQ5JQF8 200 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 CEP85LQ5SZL2 805 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 HHATQ5VTY9 493 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 HIST2H2BDQ6DRA6 164 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 REEP3Q6NUK4 255 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 KIR3DL3Q8N743 410 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 ZNF283Q8N7M2 679 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 IPCEF1Q8WWN9 437 aaPredicted RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 MAL2Q969L2 176 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 UPRTQ96BW1 309 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 PKNOX2Q96KN3 472 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 MAGEB18Q96M61 343 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 ZNF607Q96SK3 696 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 PRDM13Q9H4Q3 707 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 ELOVL3Q9HB03 270 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TUBG2Q9NRH3 451 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 MAN2C1Q9NTJ4 1040 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TAS2R5Q9NYW4 299 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 ZIM2Q9NZV7 527 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 STX18Q9P2W9 335 aaKnown RBP7.58□□□□□ -1.2
SMG6-218ENST00000575454 KLHL21Q9UJP4 597 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 ZNF229Q9UJW7 825 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 LRCH1Q9Y2L9 728 aa7.58□□□□□ -1.2
SMG6-218ENST00000575454 GMNCA6NCL1 334 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 ZSCAN5BA6NJL1 495 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SRRM5B3KS81 715 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 LRRN3E7EW58 273 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 F5H0A9 414 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 CLIC1O00299 241 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 TIMM8AO60220 97 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 ICMTO60725 284 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 ALX3O95076 343 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 PLATP00750 562 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 NUDT7P0C024 238 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 IGHV4-38-2P0DP08 117 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 NR2C1P13056 603 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 PPIBP23284 216 aaKnown RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 MPV17P39210 176 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 CDH12P55289 794 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 CDK6Q00534 326 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 STX3Q13277 289 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 CDK5R2Q13319 367 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 HLXQ14774 488 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms