RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RAB39AQ14964 217 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 FAM205BPQ63HN1 556 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 UGT2A3Q6UWM9 527 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 CYP4Z1Q86W10 505 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 CCDC36Q8IYA8 594 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 GTPBP3Q969Y2 492 aaKnown RBP7.48□□□□□ -1.21
SMG6-216ENST00000575176 Q96MF0 132 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 SORCS2Q96PQ0 1159 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 WNT5BQ9H1J7 359 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 OR52D1Q9H346 318 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SMG6-216ENST00000575176 B3GAT2Q9NPZ5 323 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
SMG6-216ENST00000575176 SLC7A8Q9UHI5 535 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 LOC100509620A0A075B734 347 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ARPC3O15145 178 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 LY6HO94772 140 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 UBL3O95164 117 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 NDUFB2O95178 105 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 HIST1H2ABP04908 130 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 SERPINA5P05154 406 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 OR8G3PP0DMU2 310 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 APEHP13798 732 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 CD99P14209 185 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ZNF32P17041 273 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 NR4A1P22736 598 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 PAX7P23759 505 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 APOBEC3AP31941 199 aaPredicted RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 PTDSS1P48651 473 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 ATP5J2P56134 94 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 CLRN1P58418 232 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ERVS71-1P61550 626 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 RAB1AP62820 205 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 MXRA7P84157 204 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 PIGFQ07326 219 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 NPRL3Q12980 569 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 TSPAN31Q12999 210 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 FAM27BQ5VT28 67 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 OTPQ5XKR4 325 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 SMARCD3Q6STE5 483 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 RFPL4BQ6ZWI9 263 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 HIST3H2AQ7L7L0 130 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 HDDC2Q7Z4H3 204 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 DHFR2Q86XF0 187 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ZNF101Q8IZC7 436 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 PAPD5Q8NDF8 572 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 OR10H5Q8NGA6 315 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 FANK1Q8TC84 345 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 CANT1Q8WVQ1 401 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ZNRF4Q8WWF5 429 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 HIST1H2ACQ93077 130 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 POM121L2Q96KW2 1035 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ZNF570Q96NI8 536 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 DOK1Q99704 481 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ZNF416Q9BWM5 594 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 MRPL37Q9BZE1 423 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 TRIM15Q9C019 465 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 CXorf56Q9H5V9 222 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 DENND2DQ9H6A0 471 aaPredicted RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 SIAEQ9HAT2 523 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 MOV10Q9HCE1 1003 aaKnown RBP7.47□□□□□ -1.21
SMG6-216ENST00000575176 POLE4Q9NR33 117 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 POMPQ9Y244 141 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 POFUT2Q9Y2G5 429 aa7.47□□□□□ -1.21
SMG6-216ENST00000575176 ANK2Q01484 3957 aa7.46□□□□□ -1.21
SMG6-216ENST00000575176 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.21
SMG6-216ENST00000575176 IGLV3-9A0A075B6K5 115 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 IGHV4-30-2A0A087WSY4 118 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 UNC119BA6NIH7 251 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 AQP12BA6NM10 295 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 VWC2LB2RUY7 222 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 H7C1Q1 480 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 PPP1R3DO95685 299 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 GPANK1O95872 356 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 CRYAAP02489 173 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 CD79AP11912 226 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 CCL2P13500 99 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 FOSL1P15407 271 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 ITGA2P17301 1181 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 LAP3P28838 519 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 FABP6P51161 128 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 HIST1H3AP68431 136 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 PSG4Q00888 419 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 CD47Q08722 323 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
SMG6-216ENST00000575176 SNTB2Q13425 540 aaKnown RBP7.46□□□□□ -1.22
SMG6-216ENST00000575176 TNK1Q13470 666 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 RFX4Q33E94 735 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 KRTAP27-1Q3LI81 207 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 THEM4Q5T1C6 240 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 AGAP6Q5VW22 663 aa7.46□□□□□ -1.22
SMG6-216ENST00000575176 KRT80Q6KB66 452 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms