RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ASB18Q6ZVZ8 466 aa25.36■■□□□ 1.65
CTDNEP1-210ENST00000574322 MAP6Q96JE9 813 aa25.36■■□□□ 1.65
CTDNEP1-210ENST00000574322 BOKQ9UMX3 212 aaPredicted RBP25.36■■□□□ 1.65
CTDNEP1-210ENST00000574322 ZNF281Q9Y2X9 895 aa25.36■■□□□ 1.65
CTDNEP1-210ENST00000574322 CMAHPQ9Y471 501 aa25.36■■□□□ 1.65
CTDNEP1-210ENST00000574322 PSMD9O00233 223 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 IGHG1P01857 330 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 RFPL3SP0C7P2 107 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 ZNF43P17038 809 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 CALRP27797 417 aaKnown RBP25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 ADAM8P78325 824 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 FMODQ06828 376 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 ALKBH1Q13686 389 aaKnown RBP25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 YIF1BQ5BJH7 314 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 SPINK14Q6IE38 97 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 SNIP1Q8TAD8 396 aaKnown RBP25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 AMELYQ99218 206 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 SLC30A2Q9BRI3 323 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 NAA11Q9BSU3 229 aaPredicted RBP25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 EMC6Q9BV81 110 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 RNF32Q9H0A6 362 aa25.35■■□□□ 1.65
CTDNEP1-210ENST00000574322 A0A0J9YW62 118 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 RAMP1O60894 148 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 AQP8O94778 261 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 UCHL1P09936 223 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 CLN3Q13286 438 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 HIST3H3Q16695 136 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 ZNF679Q8IYX0 411 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 FAM83FQ8NEG4 500 aaPredicted RBP25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 NOXO1Q8NFA2 376 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 CEP19Q96LK0 163 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 IGKV1D-43A0A0B4J1Z2 117 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 MYL9P24844 172 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 RPS27P42677 84 aaKnown RBP25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 CD97P48960 835 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 IFITM3Q01628 133 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 GPAT4Q86UL3 456 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 OR14L1PQ8NHC6 308 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 SIGLEC12Q96PQ1 595 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 PDCD1LG2Q9BQ51 273 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 SLCO1C1Q9NYB5 712 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 IKZF2Q9UKS7 526 aa25.34■■□□□ 1.65
CTDNEP1-210ENST00000574322 PINLYPA6NC86 204 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 C1QTNF9BB2RNN3 333 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 LOC110117498-PIK3R3F6TDL0 507 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 ARL6IP5O75915 188 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 ZFPL1O95159 310 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 SPARCP09486 303 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 C1QTNF9P0C862 333 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 GPR85P60893 370 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 SLC17A1Q14916 467 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 KCTD18Q6PI47 426 aaPredicted RBP25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 UNQ6494/PRO21346Q6UXR6 183 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 YRDCQ86U90 279 aaKnown RBP25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 GLB1L2Q8IW92 636 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 OR2M7Q8NG81 312 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 OR13C5Q8NGS8 318 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 FOXN4Q96NZ1 517 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 ATF6BQ99941 703 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 UGT2A1Q9Y4X1 527 aa25.33■■□□□ 1.65
CTDNEP1-210ENST00000574322 NCKAP5O14513 1909 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 LINC01387J3KSC0 135 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 RGS5O15539 181 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 WDPCPO95876 746 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 CAV3P56539 151 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 RAC3P60763 192 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 TOMM20Q15388 145 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 OR1C1Q15619 314 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 FAM27D1Q5T7N8 215 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 DDI2Q5TDH0 399 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 NR2C2APQ86WQ0 139 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 ACOT12Q8WYK0 555 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 MIXL1Q9H2W2 232 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 FRRS1LQ9P0K9 344 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 ING1Q9UK53 422 aaPredicted RBP25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 FREM3P0C091 2139 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 ARPC4-TTLL3A0A0A6YYG9 625 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 UPK1BO75841 260 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 ZNF823P16415 610 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 KLK2P20151 261 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 CLRN1P58418 232 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 MEP1BQ16820 701 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 Q6ZNX1 250 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 VASH2Q86V25 355 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 LAX1Q8IWV1 398 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 CHPT1Q8WUD6 406 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 HSD17B8Q92506 261 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 ABHD6Q9BV23 337 aa25.32■■□□□ 1.64
CTDNEP1-210ENST00000574322 MED12Q93074 2177 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 RPP14O95059 124 aaKnown RBP25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 MPZL1O95297 269 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 ZNF181Q2M3W8 571 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 RGS21Q2M5E4 152 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 HBMQ6B0K9 141 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 SLC25A47Q6Q0C1 308 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 GGNQ86UU5 652 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 GALNT16Q8N428 558 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 OR2G2Q8NGZ5 317 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 RNF128Q8TEB7 428 aa25.31■■□□□ 1.64
CTDNEP1-210ENST00000574322 NSMAFQ92636 917 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms