RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 HLA-HP01893 362 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 OSMP13725 252 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 MSR1P21757 451 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PRKACGP22612 351 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 DNASE1P24855 282 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 LOXP28300 417 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDKN2AP42771 156 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PTDSS1P48651 473 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 KRTAP10-9P60411 292 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PCBD1P61457 104 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLP2Q04941 152 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PIGFQ07326 219 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 NPRL3Q12980 569 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 FAM27BQ5VT28 67 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 ADAM5Q6NVV9 412 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC27A4Q6P1M0 643 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 C20orf204Q6ZNR8 217 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 MDP1Q86V88 176 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 SKA3Q8IX90 412 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 LNX2Q8N448 690 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 LRRC18Q8N456 261 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR52E2Q8NGJ4 325 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 AKAP1Q92667 903 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 HS3ST6Q96QI5 342 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 NMNAT3Q96T66 252 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 RERGLQ9H628 205 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 FAIMQ9NVQ4 179 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 B3GNT2Q9NY97 397 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 NOTCH2Q04721 2471 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 ROS1P08922 2347 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 DSCAMO60469 2012 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 SPG11Q96JI7 2443 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 IQCMA0A1B0GVH7 501 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 RIIAD1A6NNX1 92 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 HS3ST1O14792 307 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGLV1-44P01699 117 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CST2P09228 141 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CTLA4P16410 223 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF3P17036 446 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 POU1F1P28069 291 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 LAP3P28838 519 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDAP32320 146 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 GIPRP48546 466 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CENPAP49450 140 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 IDH3GP51553 393 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDH11P55287 796 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 GLO1Q04760 184 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 KEAP1Q14145 624 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC35F1Q5T1Q4 408 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 FOXL2NBQ6ZUU3 175 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 PTCHD4Q6ZW05 846 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDH24Q86UP0 819 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 GLB1L2Q8IW92 636 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 ALDH16A1Q8IZ83 802 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 HS3ST5Q8IZT8 346 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 ICA1LQ8NDH6 482 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 NINJ1Q92982 152 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 FBXW5Q969U6 566 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 NUAK2Q9H093 628 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 SEMA6AQ9H2E6 1030 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 RPRD1BQ9NQG5 326 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 C12orf71A8MTZ7 269 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 VSTM5A8MXK1 200 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLAUP00749 431 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 RAF1P04049 648 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 HMGN1P05114 100 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 CECR9P0C854 216 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PAICSP22234 425 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 GRK5P34947 590 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ESRRGP62508 458 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 NAAAQ02083 359 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 HSF2Q03933 536 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PGGHGQ32M88 737 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF672Q499Z4 452 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 FAHD1Q6P587 224 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PAMR1Q6UXH9 720 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 SYT9Q86SS6 491 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PARP8Q8N3A8 854 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF611Q8N823 705 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 SDR9C7Q8NEX9 313 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR4F15Q8NGB8 312 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR8D4Q8NGM9 314 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR2T4Q8NH00 348 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms