RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PSMD12O00232 456 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 CXCR6O00574 342 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 SIGLEC5O15389 551 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 BIRC5O15392 142 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 ENSAO43768 121 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 KLRC4O43908 158 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 MPZL2O60487 215 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DPM1O60762 260 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DCTN3O75935 186 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TDP2O95551 362 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 IFNA21P01568 189 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 CATP04040 527 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 RNASE1P07998 156 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 FAM106CPP0CH98 169 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 IGHV4-31P0DP07 118 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 IL12AP29459 219 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DCTP40126 519 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TFPI2P48307 235 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 HCAR3P49019 387 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 ACOT2P49753 483 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 SSR4P51571 173 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 B3GALT5-AS1P59052 145 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 AP1S1P61966 158 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 UNC119Q13432 240 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF268Q14587 947 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 ABRAXAS2Q15018 415 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TOMM34Q15785 309 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DUSP5Q16690 384 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TRIM16LQ309B1 348 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 SPIN4Q56A73 249 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 MARC1Q5VT66 337 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 C1orf146Q5VVC0 180 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 MED27Q6P2C8 311 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM179Q6ZVK1 233 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 PIM3Q86V86 326 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 HORMAD1Q86X24 394 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 VKORC1L1Q8N0U8 176 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 DUSP18Q8NEJ0 188 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 OR1M1Q8NGA1 313 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 ZPLD1Q8TCW7 415 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 IL1F10Q8WWZ1 152 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 RTP4Q96DX8 246 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TCEAL4Q96EI5 215 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 MOCOSQ96EN8 888 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 NSL1Q96IY1 281 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 CSF3RQ99062 836 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 HOPXQ9BPY8 73 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM109Q9BVC6 243 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 FAIM2Q9BWQ8 316 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 RHOFQ9HBH0 211 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 C3orf14Q9HBI5 128 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 SDR39U1Q9NRG7 319 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 GIN1Q9NXP7 522 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 IL17CQ9P0M4 197 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 PAK5Q9P286 719 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 KLHL21Q9UJP4 597 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 FARSAQ9Y285 508 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
TOPBP1-210ENST00000572787 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 EFCAB9A8MZ26 197 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 DISC1C4P0D8 188 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 H3BMQ9 156 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 M0QZK8 103 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 KCNK1O00180 336 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 CDC7O00311 574 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ACOT8O14734 319 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 SURF4O15260 269 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 PI15O43692 258 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 SLC16A7O60669 478 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 RAMP1O60894 148 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 WDR1O75083 606 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 EEDO75530 441 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 AQP8O94778 261 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 CLIC3O95833 236 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 RLN2P04090 185 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 RPLP0P05388 317 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 NBEAP1P0C6P0 100 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 LINC00614P0C842 121 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 GTF2F2P13984 249 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 KCNE1P15382 129 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 UGT2B7P16662 529 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 CSNK2A2P19784 350 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 PSMA1P25786 263 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 FGF9P31371 208 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TAS2R39P59534 338 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 HILS1P60008 231 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ERVPABLB-1P60509 514 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ABCE1P61221 599 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 FCHO2Q0JRZ9 810 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF234Q14588 700 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 OXA1LQ15070 435 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 PSMD5Q16401 504 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM52BQ4KMG9 183 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 VWA2Q5GFL6 755 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 FNBP1LQ5T0N5 605 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 CPTPQ5TA50 214 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms