RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SLC36A2Q495M3 483 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 TMEM53Q6P2H8 277 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 IGFN1Q86VF2 1251 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 ZNF101Q8IZC7 436 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 RBM15BQ8NDT2 890 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 OR2T12Q8NG77 320 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 NSMAFQ92636 917 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 POM121L2Q96KW2 1035 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 C19orf24Q9BVV8 132 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 HINT3Q9NQE9 182 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 TREM2Q9NZC2 230 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 ZNF346Q9UL40 294 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 A0A1W2PPW3 197 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 ELOVL7A1L3X0 281 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 NPIPB13A6NJU9 1138 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 C17orf100A8MU93 164 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 NPIPB4C9JG80 1138 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 MCIDASD6RGH6 385 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 PRSS23O95084 383 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 VIMP08670 466 aaKnown RBP15.45■□□□□ 0.06
CHD3-214ENST00000572579 ZNF32P17041 273 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 ACHEP22303 614 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 RBMXP38159 391 aaKnown RBP15.45■□□□□ 0.06
CHD3-214ENST00000572579 DAP3P51398 398 aaKnown RBP15.45■□□□□ 0.06
CHD3-214ENST00000572579 TMEM33P57088 247 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 CCL8P80075 99 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 MRPS11P82912 194 aaKnown RBP15.45■□□□□ 0.06
CHD3-214ENST00000572579 PSG4Q00888 419 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 C8orf82Q6P1X6 216 aaPredicted RBP15.45■□□□□ 0.06
CHD3-214ENST00000572579 TBPL2Q6SJ96 375 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 DPPA2Q7Z7J5 298 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 AKR7LQ8NHP1 331 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 ZNF519Q8TB69 540 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 SYNPRQ8TBG9 265 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 BPIFA2Q96DR5 249 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 PRRC1Q96M27 445 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 WNT5BQ9H1J7 359 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 CDH20Q9HBT6 801 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 CACNG2Q9Y698 323 aa15.45■□□□□ 0.06
CHD3-214ENST00000572579 CDC14BO60729 498 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 IFNA14P01570 189 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 LCKP06239 509 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 IFI30P13284 250 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 MPV17P39210 176 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 GPR6P46095 362 aaPredicted RBP15.44■□□□□ 0.06
CHD3-214ENST00000572579 ZNF84P51523 738 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 DVL1P1P54792 670 aaPredicted RBP15.44■□□□□ 0.06
CHD3-214ENST00000572579 TOP3AQ13472 1001 aaPredicted RBP15.44■□□□□ 0.06
CHD3-214ENST00000572579 SGCAQ16586 387 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 ALG10Q5BKT4 473 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 FAM27BQ5VT28 67 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 NRMQ8IXM6 262 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 PCYOX1LQ8NBM8 494 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 OR51A7Q8NH64 312 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 ZNF416Q9BWM5 594 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 SMURF2Q9HAU4 748 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 GID8Q9NWU2 228 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 CAPN7Q9Y6W3 813 aa15.44■□□□□ 0.06
CHD3-214ENST00000572579 TRAV27A0A087WT01 109 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 SLC22A23A1A5C7 686 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 NME4O00746 187 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 CDC42EP2O14613 210 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 IGHMP01871 453 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 SAGP10523 405 aaPredicted RBP15.43■□□□□ 0.06
CHD3-214ENST00000572579 STOMP27105 288 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 LAP3P28838 519 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 LSP1P33241 339 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 KLF3P57682 345 aaPredicted RBP15.43■□□□□ 0.06
CHD3-214ENST00000572579 CTXN1P60606 82 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 RPL27P61353 136 aaKnown RBP15.43■□□□□ 0.06
CHD3-214ENST00000572579 ERVK-25P63136 954 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 GLO1Q04760 184 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 LIPEQ05469 1076 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 ST3GAL3Q11203 375 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 MAPRE2Q15555 327 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 NKPD1Q17RQ9 610 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 TBC1D28Q2M2D7 210 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 SPRNQ5BIV9 151 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 SPATA46Q5T0L3 261 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 FOXL2NBQ6ZUU3 175 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 TREML1Q86YW5 311 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 C11orf40Q8WZ69 217 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 MARS2Q96GW9 593 aaKnown RBP15.43■□□□□ 0.06
CHD3-214ENST00000572579 CCDC134Q9H6E4 229 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 LPAR2Q9HBW0 351 aa15.43■□□□□ 0.06
CHD3-214ENST00000572579 A0A087WUU8 490 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 IQCMA0A1B0GVH7 501 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 B4DSR2 109 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 PPIHO43447 177 aaKnown RBP15.42■□□□□ 0.06
CHD3-214ENST00000572579 ENTPD5O75356 428 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 NGFP01138 241 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 IGHV3-13P01766 116 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 GAAP10253 952 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 CCNOP22674 350 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 RAD52P43351 418 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 PLP2Q04941 152 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 PRKCDQ05655 676 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 ENDOGQ14249 297 aaKnown RBP15.42■□□□□ 0.06
CHD3-214ENST00000572579 THEM4Q5T1C6 240 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 UGT2A3Q6UWM9 527 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms