RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 RAB35Q15286 201 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 ZNF525Q8N782 197 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 CLDN22Q8N7P3 220 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 LRRC75AQ8NAA5 344 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 NUP37Q8NFH4 326 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 RSRC1Q96IZ7 334 aaKnown RBP12.59□□□□□ -0.39
LITAF-208ENST00000571627 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 ALG12Q9BV10 488 aa12.59□□□□□ -0.39
LITAF-208ENST00000571627 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
LITAF-208ENST00000571627 RTTNQ86VV8 2226 aa12.58□□□□□ -0.39
LITAF-208ENST00000571627 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 UNC119BA6NIH7 251 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 TNFRSF11BO00300 401 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 MGRN1O60291 552 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 PTP4A3O75365 173 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 UBL3O95164 117 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 NDUFB2O95178 105 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 CD14P08571 375 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 CDAP32320 146 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 ZNF84P51523 738 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 ZNF133P52736 654 aaPredicted RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 SNRPD2P62316 118 aaKnown RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 DAG1Q14118 895 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 FLOT2Q14254 428 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 GK3PQ14409 553 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 NRN1LQ496H8 165 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 LRRC18Q8N456 261 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 NSMAFQ92636 917 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 NMD3Q96D46 503 aaKnown RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 SORCS2Q96PQ0 1159 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 RBP7Q96R05 134 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 CADM1Q9BY67 442 aaKnown RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 REG4Q9BYZ8 158 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 MMADHCQ9H3L0 296 aaPredicted RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
LITAF-208ENST00000571627 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 GRHPRQ9UBQ7 328 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 SIGLEC7Q9Y286 467 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 UGT2A1Q9Y4X1 527 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 LYVE1Q9Y5Y7 322 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 PMF1-BGLAPU3KQ54 211 aa12.58□□□□□ -0.4
LITAF-208ENST00000571627 DHRS12A0PJE2 317 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 FAM171A2A8MVW0 826 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 H7C1C5 153 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 GPRIN2O60269 458 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 FARS2O95363 451 aaKnown RBP12.57□□□□□ -0.4
LITAF-208ENST00000571627 BMP4P12644 408 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ZNF35P13682 527 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ZNF26P17031 533 aaPredicted RBP12.57□□□□□ -0.4
LITAF-208ENST00000571627 FPR3P25089 353 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 LCN6P62502 163 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ERVK-25P63136 954 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 THEM4Q5T1C6 240 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 C10orf128Q5T292 105 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 OR2T5Q6IEZ7 315 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 C1orf94Q6P1W5 598 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 DPPA2Q7Z7J5 298 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ZER1Q7Z7L7 766 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 SVOPLQ8N434 492 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ARIH2OSQ8N7S6 290 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 IL17RDQ8NFM7 739 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 OR2T29Q8NH02 315 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ZNF519Q8TB69 540 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 GNPDA2Q8TDQ7 276 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 GPX7Q96SL4 187 aaPredicted RBP12.57□□□□□ -0.4
LITAF-208ENST00000571627 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
LITAF-208ENST00000571627 ZNF442Q9H7R0 627 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 YY1AP1Q9H869 796 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 REEP1Q9H902 201 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 RNF121Q9H920 327 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 POMPQ9Y244 141 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ADAM18Q9Y3Q7 739 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 ABCA1O95477 2261 aa12.57□□□□□ -0.4
LITAF-208ENST00000571627 SONP18583 2426 aaKnown RBP12.56□□□□□ -0.4
LITAF-208ENST00000571627 HIVEP2P31629 2446 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 B9A039 149 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 XKRYO14609 159 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 AHCYL1O43865 530 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 SERPINA5P05154 406 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
LITAF-208ENST00000571627 NPR2P20594 1047 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 NR4A1P22736 598 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 KRTAP1-1Q07627 177 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 EFNB3Q15768 340 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 SMARCD3Q6STE5 483 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 CLEC2AQ6UVW9 174 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 DPY19L2P2Q6ZN68 376 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 SPATA24Q86W54 205 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 ADGRG5Q8IZF4 528 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 OR4C15Q8NGM1 316 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 PLK3Q9H4B4 646 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms