RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PSMB1P20618 241 aaKnown RBP11.63□□□□□ -0.55
CCDC40-205ENST00000571028 MPGP29372 298 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 RPS6KA3P51812 740 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 FMODQ06828 376 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 KRR1Q13601 381 aaKnown RBP11.63□□□□□ -0.55
CCDC40-205ENST00000571028 SLC36A3Q495N2 470 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 C6orf52Q5T4I8 152 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 KLHL17Q6TDP4 642 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 C22orf34Q6ZV56 151 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 ARIH2OSQ8N7S6 290 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 OR8D4Q8NGM9 314 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 MAGEE2Q8TD90 523 aaPredicted RBP11.63□□□□□ -0.55
CCDC40-205ENST00000571028 HTRA1Q92743 480 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 TMEM54Q969K7 222 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 NRIP3Q9NQ35 241 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 OAZ3Q9UMX2 235 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 ARRDC5A6NEK1 342 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 A6NIZ1 184 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 IMPA2O14732 288 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 MITFO75030 526 aaPredicted RBP11.62□□□□□ -0.55
CCDC40-205ENST00000571028 SLC2A10O95528 541 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 IGHMP01871 453 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 PGA3P0DJD8 388 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 COX5AP20674 150 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 CDKN1AP38936 164 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 CAPZA2P47755 286 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 DAPP51397 102 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 RAP1BP61224 184 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 RAP1AP62834 184 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 TUBA1BP68363 451 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 TUBA4AP68366 448 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 TGFBR3Q03167 851 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 MESTQ5EB52 335 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 LRFN4Q6PJG9 635 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 TUBA1AQ71U36 451 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 FAM122BQ7Z309 247 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 JAZF1Q86VZ6 243 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 IQCF1Q8N6M8 205 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 OR1K1Q8NGR3 316 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 OR4K13Q8NH42 304 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF519Q8TB69 540 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 TEX47Q8TBZ9 253 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 FBXW5Q969U6 566 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 MCHR2Q969V1 340 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 LRR1Q96L50 414 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 RBP7Q96R05 134 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 RHNO1Q9BSD3 238 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
CCDC40-205ENST00000571028 BARX1Q9HBU1 254 aaPredicted RBP11.62□□□□□ -0.55
CCDC40-205ENST00000571028 PAPOLBQ9NRJ5 636 aaKnown RBP11.62□□□□□ -0.55
CCDC40-205ENST00000571028 STX18Q9P2W9 335 aaKnown RBP11.62□□□□□ -0.55
CCDC40-205ENST00000571028 ANK2Q01484 3957 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 IGKV1D-43A0A0B4J1Z2 117 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 DHHO43323 396 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 THBDP07204 575 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 B4GALT1P15291 398 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 HIST1H1CP16403 213 aaKnown RBP11.61□□□□□ -0.55
CCDC40-205ENST00000571028 SDHAP31040 664 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
CCDC40-205ENST00000571028 CENPAP49450 140 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 DBPQ10586 325 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-205ENST00000571028 RCN1Q15293 331 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 TAB1Q15750 504 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 GABRA6Q16445 453 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 TBRG1Q3YBR2 411 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 FAM205BPQ63HN1 556 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 RPL13AP3Q6NVV1 102 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 KLHL24Q6TFL4 600 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF813Q6ZN06 617 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 SVOPLQ8N434 492 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 OR52E2Q8NGJ4 325 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 OR4Q3Q8NH05 313 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 MUCL1Q96DR8 90 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 NRBF2Q96F24 287 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 CIB1Q99828 191 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 MRPL13Q9BYD1 178 aaKnown RBP11.61□□□□□ -0.55
CCDC40-205ENST00000571028 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 REV1Q9UBZ9 1251 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
CCDC40-205ENST00000571028 RAI1Q7Z5J4 1906 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 NPIPB13A6NJU9 1138 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 OR5H1A6NKK0 313 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF99A8MXY4 864 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 NPIPB4C9JG80 1138 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SLC16A7O60669 478 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 RENP00797 406 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 OSMP13725 252 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 CDAP32320 146 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF83P51522 516 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF84P51523 738 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 UBE2NP61088 152 aaKnown RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 COX10Q12887 443 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 PPA1Q15181 289 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms