RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CLN8Q9UBY8 286 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC23A2Q9UGH3 650 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MLXQ9UH92 298 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 NXT1Q9UKK6 140 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 MEMO1Q9Y316 297 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RNF11Q9Y3C5 154 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ATG4BQ9Y4P1 393 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OARD1Q9Y530 152 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 KMT2EQ8IZD2 1858 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 KNL1Q8NG31 2342 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRUNE2Q8WUY3 3088 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TRBV7-9A0A0J9YWB2 115 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CDC14CA4D256 554 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ASPDHA6ND91 283 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CENPXA8MT69 81 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 C9J4A7 227 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 NPIPB11E5RHQ5 1161 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 G3V3Y1 287 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CLDN34H7C241 214 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 GFYI3L273 518 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 M0QXV9 152 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 M0R296 226 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PSMD12O00232 456 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 ADAM10O14672 748 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TFECO14948 347 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 UBDO15205 165 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SIVA1O15304 175 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PRKYO43930 277 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 NUAK1O60285 661 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SH3BGRLO75368 114 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 HSBP1O75506 76 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CREG1O75629 220 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 GLSO94925 669 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 ESRRBO95718 433 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PAK4O96013 591 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 ACTL6AO96019 429 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TCRBP04435 133 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CEACAM5P06731 702 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR56A5P0C7T3 313 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DANCRP0C864 163 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 HOXB2P14652 356 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 IL9P15248 144 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZNF23P17027 643 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 GPX3P22352 226 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DCKP27707 260 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CALCRP30988 508 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RCVRNP35243 200 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TIMP3P35625 211 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 GPX4P36969 197 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 CDX1P47902 265 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 NUDT2P50583 147 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 IDH3GP51553 393 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 DIO3P55073 304 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 MTCP1P56278 107 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CLDN2P57739 230 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FOXL2P58012 376 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR4D2P58180 307 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PFN3P60673 137 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RBX1P62877 108 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PPIAP62937 165 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 IL13RA1P78552 427 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 MRPS34P82930 218 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 VLDLRP98155 873 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CDK3Q00526 305 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DEFA6Q01524 100 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 HMGCS1Q01581 520 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SRSF1Q07955 248 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMG6-208ENST00000570874 SRSF6Q13247 344 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 CDK5R2Q13319 367 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 KRR1Q13601 381 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 RAB31Q13636 194 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FASTKQ14296 549 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 ABRAXAS2Q15018 415 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SYPL1Q16563 259 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 NDUFA9Q16795 377 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 MEP1AQ16819 746 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZIK1Q3SY52 487 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 GCSAMLQ5JQS6 135 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 NKAPLQ5M9Q1 402 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 IDNKQ5T6J7 187 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAM69BQ5VUD6 431 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAM46CQ5VWP2 391 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZNF776Q68DI1 518 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 BICRALQ6AI39 1079 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 REP15Q6BDI9 236 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR4F3Q6IEY1 312 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAHD2BQ6P2I3 314 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ACSM6Q6P461 480 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DNM1P34Q6PK57 102 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DHRS4L2Q6PKH6 230 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 UGT2A3Q6UWM9 527 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SIGLEC15Q6ZMC9 328 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RNF111Q6ZNA4 994 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 Q6ZSR9 355 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 MOB3CQ70IA8 216 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PPP1R32Q7Z5V6 425 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms