RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 GPR35Q9HC97 309 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 PRSS50Q9UI38 385 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 OSGIN2Q9Y236 505 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 COMMD3-BMI1R4GMX3 469 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 ALPK2Q86TB3 2170 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 MT-ND2P03891 347 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 CDK1P06493 297 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 STSP08842 583 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 SBK2P0C263 348 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 LAP3P28838 519 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 CA7P43166 264 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 PMPCAQ10713 525 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 MEP1BQ16820 701 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 OTPQ5XKR4 325 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 LINGO2Q7L985 606 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 NAXEQ8NCW5 288 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 OR10H5Q8NGA6 315 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 OR6N2Q8NGY6 317 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 TMEM80Q96HE8 168 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 INTS14Q96SY0 518 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 SFXN3Q9BWM7 321 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 PROCRQ9UNN8 238 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 EXOGQ9Y2C4 368 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 UGT2A1Q9Y4X1 527 aa13.6□□□□□ -0.23
HERPUD1-219ENST00000570273 GTF3C1Q12789 2109 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 E9PLN8 166 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 TNFSF13O75888 250 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 PRB1P04280 392 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 CDAP32320 146 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 GUCA1AP43080 201 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 HSF2Q03933 536 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 FAPQ12884 760 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 MRPL49Q13405 166 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF773Q6PK81 442 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 NCCRP1Q6ZVX7 275 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC16A9Q7RTY1 509 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 ABHD12BQ7Z5M8 362 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 BTLAQ7Z6A9 289 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC35F2Q8IXU6 374 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 TIGD4Q8IY51 512 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC26A10Q8NG04 563 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 OR10H4Q8NGA5 316 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF837Q96EG3 531 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 VKORC1Q9BQB6 163 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 MARCH7Q9H992 704 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 FGF20Q9NP95 211 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 MRPL22Q9NWU5 206 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 MALT1Q9UDY8 824 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 POLR1DQ9Y2S0 133 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 PCDHGB1Q9Y5G3 927 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 SHANK1Q9Y566 2161 aa13.59□□□□□ -0.23
HERPUD1-219ENST00000570273 A0A087WXM4 84 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 TRIM64A6NGJ6 449 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 SEC14L2O76054 403 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 MPZL1O95297 269 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 TFP02787 698 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 HTR1AP08908 422 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 SPARCP09486 303 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF823P16415 610 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 MYL12AP19105 171 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 CTSSP25774 331 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 DCKP27707 260 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ENTPD1P49961 510 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ACTC1P68032 377 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ACTA1P68133 377 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ADAM8P78325 824 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 STK11Q15831 433 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 HSPB2Q16082 182 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 SGCAQ16586 387 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 C9orf135Q5VTT2 229 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 TMEM211Q6ICI0 200 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 FOXL2NBQ6ZUU3 175 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 PRSS48Q7RTY5 328 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 SMAP2Q8WU79 429 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 HTRA1Q92743 480 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 STARD4Q96DR4 205 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 TBX5Q99593 518 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 WDR76Q9H967 626 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 EMC7Q9NPA0 242 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 POLE4Q9NR33 117 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 MEMO1Q9Y316 297 aa13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 EXOSC1Q9Y3B2 195 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-219ENST00000570273 RP1L1Q8IWN7 2480 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 A0A0G2JNJ9 132 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 C12orf71A8MTZ7 269 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 RPL36A-HNRNPH2H7BZ11 118 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 MRPS14O60783 128 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms