RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 BLOC1S5-TXNDC5H3BN57 136 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 J3QLI3 93 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 UBOX5O94941 541 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 IGHV3-13P01766 116 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 HKR1P10072 659 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 APLNRP35414 380 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 MMP15P51511 669 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 ERVK-25P63136 954 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 TEKQ02763 1124 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 PLP2Q04941 152 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 RPL18Q07020 188 aaKnown RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 TTC33Q6PID6 262 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 EPGNQ6UW88 154 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 NANOGNBQ7Z5D8 188 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 PTOV1Q86YD1 416 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 CLDN22Q8N7P3 220 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 HIPK4Q8NE63 616 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 DEFB108BQ8NET1 73 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 PFN4Q8NHR9 129 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 ADAMTS16Q8TE57 1224 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 ASB10Q8WXI3 467 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 NSMAFQ92636 917 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 TRIM44Q96DX7 344 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 ELMOD3Q96FG2 381 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF607Q96SK3 696 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 BCL2L14Q9BZR8 327 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 OR2J1Q9GZK6 312 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM38AQ9H6F2 299 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 UNKLQ9H9P5 680 aaKnown RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 NPHS2Q9NP85 383 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 NKIRAS2Q9NYR9 191 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 LEF1Q9UJU2 399 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-220ENST00000569827 C5orf49A4QMS7 147 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 PRORSD1PA6NEY8 169 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MCIDASD6RGH6 385 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 TRAPPC2LH3BP13 241 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MGRN1O60291 552 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 SERPINB7O75635 380 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 TRMUO75648 421 aaKnown RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 NGFP01138 241 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 IGHG1P01857 330 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 SBK2P0C263 348 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ASAH2BP0C7U1 165 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 FUT1P19526 365 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 TNFRSF1BP20333 461 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 FPR2P25090 351 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 STOMP27105 288 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF84P51523 738 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MTPNP58546 118 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 SRSF4Q08170 494 aaKnown RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 AGKQ53H12 422 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ARMCX4Q5H9R4 360 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF613Q6PF04 617 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 TEX29Q8N6K0 151 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MOSPD2Q8NHP6 518 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ABHD4Q8TB40 342 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 ST7LQ8TDW4 575 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 LRRC58Q96CX6 371 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MARS2Q96GW9 593 aaKnown RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 POFUT1Q9H488 388 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 CCNB1IP1Q9NPC3 277 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MEPEQ9NQ76 525 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-220ENST00000569827 UGT2A1Q9Y4X1 527 aa10.2□□□□□ -0.78
CAPN3-220ENST00000569827 MDFIC2A0A1B0GVS7 189 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 M0QX08 132 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 GPANK1O95872 356 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 GPX2P18283 190 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 CD247P20963 164 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 OMGP23515 440 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 PRTN3P24158 256 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 GCH1P30793 250 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 AQP2P41181 271 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 IDH3AP50213 366 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 UGT2B15P54855 530 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 PCBP3P57721 371 aaKnown RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 MAGOHP61326 146 aaKnown RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 FOXL1Q12952 345 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 BAMBIQ13145 260 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 TOP3AQ13472 1001 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 SGCAQ16586 387 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 HIST3H3Q16695 136 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 CYP51A1Q16850 503 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF718Q3SXZ3 478 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 MIDNQ504T8 468 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 SHISA2Q6UWI4 295 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 DLEU7Q6UYE1 221 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 RBMS3Q6XE24 437 aaKnown RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 OR1J2Q8NGS2 313 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 KLF14Q8TD94 323 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 HDAC2Q92769 488 aaKnown RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 NABP1Q96AH0 204 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 TAMM41Q96BW9 452 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms