RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SFTPA1Q8IWL2 248 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 LILRA2Q8N149 483 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CCDC54Q8NEL0 328 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 OR1L6Q8NGR2 347 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 HMGCLL1Q8TB92 370 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM110BQ8TC76 370 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CCDC107Q8WV48 283 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ELOVL3Q9HB03 270 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 Q9N2J8 555 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 MYNNQ9NPC7 610 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 POMT2Q9UKY4 750 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 VPS13CQ709C8 3753 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 NUMA1Q14980 2115 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 IGHV5-10-1A0A0J9YXX1 117 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 DISC1C4P0D8 188 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 FADS1O60427 444 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 FCMRO60667 390 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 UPK3AO75631 287 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 S100A8P05109 93 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 UCP3P55916 312 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 RAB10P61026 200 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 EFNB1P98172 346 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TLE1Q04724 770 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 FAM53BQ14153 422 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TAF13Q15543 124 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 ARL13AQ5H913 290 aaPredicted RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 LIPKQ5VXJ0 399 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TMEM215Q68D42 235 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 RBMS3Q6XE24 437 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 TMEM144Q7Z5S9 345 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TMPRSS11BQ86T26 416 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 MCHR2Q969V1 340 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TSNAXQ99598 290 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 PRRT1Q99946 306 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 BARX1Q9HBU1 254 aaPredicted RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 YARS2Q9Y2Z4 477 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 SDHDO14521 159 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 MED26O95402 600 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 CBR1P16152 277 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 DCKP27707 260 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 CPOXP36551 454 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 NUTF2P61970 127 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 ZNF616Q08AN1 781 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 SELENBP1Q13228 472 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 GABRA6Q16445 453 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TNXAQ16473 311 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 NDUFAF6Q330K2 333 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 AGKQ53H12 422 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 METRNLQ641Q3 311 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 AHSA2Q719I0 299 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 PIGQQ9BRB3 760 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 MRPS26Q9BYN8 205 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 KCNK15Q9H427 330 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 CALML5Q9NZT1 146 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TAC3Q9UHF0 121 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TRAV26-1A0A087WT03 109 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 FAM90A20PA6NIJ5 464 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 OR2J2O76002 312 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 IGHV2-70P01814 119 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TDGF1P13385 188 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 SLC19A1P41440 591 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 UBE2MP61081 183 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 PRR5P85299 388 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 NHLRC1Q6VVB1 395 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 ISCA2Q86U28 154 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 L3HYPDHQ96EM0 354 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 SLC41A3Q96GZ6 507 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 PTDSS2Q9BVG9 487 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 NAA50Q9GZZ1 169 aaKnown RBP6.02□□□□□ -1.45
SMG1-217ENST00000569764 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 SAR1AQ9NR31 198 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 SEMA5BQ9P283 1151 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 GLS2Q9UI32 602 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 ACSL6Q9UKU0 697 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 OSGIN2Q9Y236 505 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 AHCTF1Q8WYP5 2266 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 ACACBO00763 2458 aa6.02□□□□□ -1.45
SMG1-217ENST00000569764 TMEM202A6NGA9 273 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 SOX15O60248 233 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 SLC19A2O60779 497 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 SIX3O95343 332 aaPredicted RBP6.01□□□□□ -1.45
SMG1-217ENST00000569764 ADAP00813 363 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 SERPINE1P05121 402 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 CELA3BP08861 270 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 CD40P25942 277 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 EPHA3P29320 983 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 TSFMP43897 325 aaKnown RBP6.01□□□□□ -1.45
SMG1-217ENST00000569764 MLLT10P55197 1068 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 C18orf21Q32NC0 220 aaPredicted RBP6.01□□□□□ -1.45
SMG1-217ENST00000569764 TECRLQ5HYJ1 363 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 SPNS3Q6ZMD2 512 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 PUSL1Q8N0Z8 303 aaKnown RBP6.01□□□□□ -1.45
SMG1-217ENST00000569764 SLC25A45Q8N413 288 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 MARCH1Q8TCQ1 289 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 UFD1Q92890 307 aa6.01□□□□□ -1.45
SMG1-217ENST00000569764 WDR89Q96FK6 387 aaPredicted RBP6.01□□□□□ -1.45
SMG1-217ENST00000569764 TEAD3Q99594 435 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms