RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	RPTN	Q6XPR3	784 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	BEND4	Q6ZU67	534 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151		Q6ZVL8	140 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	SSX6	Q7RTT6	188 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC16A9	Q7RTY1	509 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ANKRD33	Q7Z3H0	272 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TMPRSS9	Q7Z410	1059 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	SZRD1	Q7Z422	152 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TMEM150A	Q86TG1	271 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	NAA40	Q86UY6	237 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TMPRSS12	Q86WS5	348 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	LSR	Q86X29	649 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	NRROS	Q86YC3	692 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	IZUMO1	Q8IYV9	350 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ACOT4	Q8N9L9	421 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	PNLDC1	Q8NA58	520 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	KREMEN2	Q8NCW0	462 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF740	Q8NDX6	193 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	LFNG	Q8NES3	379 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR8G5	Q8NG78	346 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR2L5	Q8NG80	312 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR1J1	Q8NGS3	322 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR13C5	Q8NGS8	318 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR13D1	Q8NGV5	346 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR5AK2	Q8NH90	309 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	OR5K2	Q8NHB8	316 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	PHOSPHO1	Q8TCT1	267 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	LIPH	Q8WWY8	451 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	HOXB13	Q92826	284 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	MCHR2	Q969V1	340 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC25A28	Q96A46	364 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZBTB8A	Q96BR9	441 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	CNRIP1	Q96F85	164 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF75A	Q96N20	296 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF681	Q96N22	645 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	F2RL3	Q96RI0	385 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	C2orf88	Q9BSF0	95 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	MENT	Q9BUN1	341 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	BCL2L14	Q9BZR8	327 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TRIM2	Q9C040	744 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	WNT10A	Q9GZT5	417 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TOLLIP	Q9H0E2	274 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZDHHC6	Q9H6R6	413 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	MED20	Q9H944	212 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TRPV4	Q9HBA0	871 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	RHOF	Q9HBH0	211 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	RAB18	Q9NP72	206 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TREM1	Q9NP99	234 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	STARD7	Q9NQZ5	370 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	GFOD1	Q9NXC2	390 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	SPG21	Q9NZD8	308 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	MRPL15	Q9P015	296 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	GHRL	Q9UBU3	117 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	KCNE5	Q9UJ90	142 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	GNG8	Q9UK08	70 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TCFL5	Q9UL49	500 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	CLEC4A	Q9UMR7	237 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	NOP16	Q9Y3C1	178 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF780B	Q9Y6R6	833 aa		4.17	□□□□□ -1.74
BBS4-216	ENST00000569151	TTC3	P53804	2025 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CCDC88C	Q9P219	2028 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CCL15-CCL14	A0A0B4J2E2	113 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF736	B4DX44	427 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RNASEK-C17orf49	H0YIS7	233 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RPL36A-HNRNPH2	H7BZ11	118 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	AGRP	O00253	132 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF208	O43345	1280 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PPIH	O43447	177 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	GMFG	O60234	142 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ICOSLG	O75144	302 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MTX2	O75431	263 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CLN5	O75503	358 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	UPK3A	O75631	287 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZFPL1	O95159	310 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	AIFM1	O95831	613 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TXNDC12	O95881	172 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	IFNA2	P01563	188 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	HLA-A	P01891	365 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CD3D	P04234	171 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CD2	P06729	351 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FCGR3A	P08637	254 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MRPL3	P09001	348 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	HOXB5	P09067	269 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SFTA3	P0C7M3	94 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ELFN1	P0C7U0	828 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	LAMP2	P13473	410 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CYBA	P13498	195 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MUC1	P15941	1255 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	HIST1H1B	P16401	226 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF14	P17017	642 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ADRA2C	P18825	462 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RAB4A	P20338	218 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RAB5A	P20339	215 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	HOXA5	P20719	270 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CXCR1	P25024	350 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CD70	P32970	193 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms