RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 UGT2A1Q9Y4X1 527 aa11.15□□□□□ -0.62
CDT1-203ENST00000569140 AP4S1Q9Y587 144 aa11.15□□□□□ -0.62
CDT1-203ENST00000569140 IMPA2O14732 288 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 SMPD2O60906 423 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 KHDRBS3O75525 346 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 IGKV3-15P01624 115 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 IGFBP1P08833 259 aaPredicted RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 HIST1H1CP16403 213 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 CD53P19397 219 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 PRKACGP22612 351 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 CDKN2AP42771 156 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 FABP6P51161 128 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 MRPS34P82930 218 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 NAAAQ02083 359 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 PLP2Q04941 152 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDT1-203ENST00000569140 KPNB1Q14974 876 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 DEFB113Q30KQ7 82 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 B3GLCTQ6Y288 498 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 ZNF611Q8N823 705 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 FGFBP3Q8TAT2 258 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 SMAP2Q8WU79 429 aaPredicted RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 PIGTQ969N2 578 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 PERPQ96FX8 193 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 MS4A3Q96HJ5 214 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 DGCR6LQ9BY27 220 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 SIAEQ9HAT2 523 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 RPRD1BQ9NQG5 326 aaKnown RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 ZNF224Q9NZL3 707 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 CRNNQ9UBG3 495 aaPredicted RBP11.14□□□□□ -0.63
CDT1-203ENST00000569140 FBXL3Q9UKT7 428 aa11.14□□□□□ -0.63
CDT1-203ENST00000569140 IQCMA0A1B0GVH7 501 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 ARRDC5A6NEK1 342 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 E7EQL1 145 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 AHCYL1O43865 530 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 TXNDC12O95881 172 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 FCGR1AP12314 374 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
CDT1-203ENST00000569140 CTLA4P16410 223 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 ZNF23P17027 643 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 MSR1P21757 451 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 FASP25445 335 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 LAP3P28838 519 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 CALCRP30988 508 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 ZNF133P52736 654 aaPredicted RBP11.13□□□□□ -0.63
CDT1-203ENST00000569140 GALK2Q01415 458 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 ATP6AP1Q15904 470 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 C3orf36Q3SXR2 165 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 KRT80Q6KB66 452 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 DPPA2Q7Z7J5 298 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 OR2T33Q8NG76 320 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 OR8D4Q8NGM9 314 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 PYDC1Q8WXC3 89 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 LRTOMTQ8WZ04 291 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 OTULINQ96BN8 352 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 TSSK2Q96PF2 358 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 BDH2Q9BUT1 245 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 SEMA6AQ9H2E6 1030 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 OR51B6Q9H340 312 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 CXorf56Q9H5V9 222 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 SRA1Q9HD15 236 aaKnown RBP11.13□□□□□ -0.63
CDT1-203ENST00000569140 B3GNT2Q9NY97 397 aa11.13□□□□□ -0.63
CDT1-203ENST00000569140 VSX1Q9NZR4 365 aaPredicted RBP11.13□□□□□ -0.63
CDT1-203ENST00000569140 COA3Q9Y2R0 106 aaPredicted RBP11.13□□□□□ -0.63
CDT1-203ENST00000569140 CENPEQ02224 2701 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 IGHV2OR16-5A0A0B4J2B6 119 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 FAM171A2A8MVW0 826 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 ARPC3O15145 178 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 IDH3BO43837 385 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 HLA-DQA2P01906 255 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 ANXA8P13928 327 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 ZNF14P17017 642 aaPredicted RBP11.12□□□□□ -0.63
CDT1-203ENST00000569140 ZNF32P17041 273 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 CCNOP22674 350 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 CRABP1P29762 137 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 APLNRP35414 380 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 DBPQ10586 325 aaPredicted RBP11.12□□□□□ -0.63
CDT1-203ENST00000569140 SNTB2Q13425 540 aaKnown RBP11.12□□□□□ -0.63
CDT1-203ENST00000569140 PABPC1L2AQ5JQF8 200 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
CDT1-203ENST00000569140 IQCF1Q8N6M8 205 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 FAM169BQ8N8A8 192 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 CYB561A3Q8NBI2 242 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 ICA1LQ8NDH6 482 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 SLC30A7Q8NEW0 376 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 OR5K1Q8NHB7 308 aa11.12□□□□□ -0.63
CDT1-203ENST00000569140 AKR7LQ8NHP1 331 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms