RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ELOVL3Q9HB03 270 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 MAN2C1Q9NTJ4 1040 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 MRPL39Q9NYK5 338 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 BTNL2Q9UIR0 455 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 TRIM33Q9UPN9 1127 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 PPP1R3CQ9UQK1 317 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 ZNF443Q9Y2A4 671 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 A0A0G2JPF8 293 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ZSCAN5BA6NJL1 495 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 HNRNPCL2B2RXH8 293 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 HNRNPCL3B7ZW38 293 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ENSAO43768 121 aaKnown RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 TIMM8AO60220 97 aaPredicted RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 HNRNPCL1O60812 293 aaKnown RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 TSPAN9O75954 239 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 FSTL3O95633 263 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 SFTPBP07988 381 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 HNRNPCL4P0DMR1 293 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 HLA-DOBP13765 273 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 STOMP27105 288 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 GCAP28676 217 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CASQ1P31415 396 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 S100A3P33764 101 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 TGFBR2P37173 567 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 GDI2P50395 445 aaKnown RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 SEC61A1P61619 476 aaKnown RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 HERPUD1Q15011 391 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ZMYND11Q15326 602 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CD276Q5ZPR3 534 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 FAM91A1Q658Y4 838 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 DHRS7BQ6IAN0 325 aaPredicted RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 ULK3Q6PHR2 472 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 KLBQ86Z14 1044 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ALDH16A1Q8IZ83 802 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CLIP4Q8N3C7 705 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 OR4K5Q8NGD3 323 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 FGFBP3Q8TAT2 258 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 IPCEF1Q8WWN9 437 aaPredicted RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 GEMIN6Q8WXD5 167 aaKnown RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 TMEM54Q969K7 222 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 SLC25A44Q96H78 314 aaPredicted RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 TXNDC15Q96J42 360 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CCDC115Q96NT0 180 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 PANX1Q96RD7 426 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ARHGDIGQ99819 225 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 FN3KRPQ9HA64 309 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 TMEM165Q9HC07 324 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CCNB1IP1Q9NPC3 277 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 ACOXLQ9NUZ1 547 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 KLHL14Q9P2G3 628 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 GIMAP2Q9UG22 337 aa7.25□□□□□ -1.25
SMG1-216ENST00000569122 CAB39Q9Y376 341 aaPredicted RBP7.25□□□□□ -1.25
SMG1-216ENST00000569122 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 CCDC154A6NI56 674 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 LRRC30A6NM36 301 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 TMEM233B4DJY2 109 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 TMEM178BH3BS89 294 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 PLPP3O14495 311 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 PHYHO14832 338 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 MT-ATP6P00846 226 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 CHRNGP07510 517 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 VIMP08670 466 aaKnown RBP7.24□□□□□ -1.25
SMG1-216ENST00000569122 PRG2P13727 222 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 GSTM3P21266 225 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 IER3P46695 156 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 NPY4RP50391 375 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 BIDP55957 195 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 FGF12P61328 243 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 EMX1Q04741 257 aaPredicted RBP7.24□□□□□ -1.25
SMG1-216ENST00000569122 DOC2BQ14184 412 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 ALG10BQ5I7T1 473 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 ZNF774Q6NX45 483 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 ZNF621Q6ZSS3 439 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 Q6ZSV7 163 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 HDDC2Q7Z4H3 204 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 SERPINA11Q86U17 422 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 LDLRAD3Q86YD5 345 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 C1orf87Q8N0U7 546 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 C10orf53Q8N6V4 93 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 SLC25A40Q8TBP6 338 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 C3orf30Q96M34 536 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 OR2J1Q9GZK6 312 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 PPCSQ9HAB8 311 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 SIAEQ9HAT2 523 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 AURKAIP1Q9NWT8 199 aaPredicted RBP7.24□□□□□ -1.25
SMG1-216ENST00000569122 CLN8Q9UBY8 286 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 FAM96BQ9Y3D0 163 aa7.24□□□□□ -1.25
SMG1-216ENST00000569122 ZNF816-ZNF321PA0A0X1KG74 233 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 A0A1W2PPM1 405 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 C5orf49A4QMS7 147 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 CENPBD1B2RD01 187 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 E9PBE3 544 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 RIPK2O43353 540 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 ZNF500O60304 480 aaPredicted RBP7.23□□□□□ -1.25
SMG1-216ENST00000569122 HPRP00739 348 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 IGHG1P01857 330 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 QDPRP09417 244 aa7.23□□□□□ -1.25
SMG1-216ENST00000569122 ADORA3P0DMS8 318 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms