RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ALG10Q5BKT4 473 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 ARMC4Q5T2S8 1044 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 FKBP9P1Q75LS8 142 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 CBLL1Q75N03 491 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 SLC16A14Q7RTX9 510 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 NRMQ8IXM6 262 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 FAM162AQ96A26 154 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 MRPL24Q96A35 216 aaKnown RBP12.45□□□□□ -0.42
CMTM3-215ENST00000568477 DUS3LQ96G46 650 aaKnown RBP12.45□□□□□ -0.42
CMTM3-215ENST00000568477 HSH2DQ96JZ2 352 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 TRIM15Q9C019 465 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 C1orf198Q9H425 327 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 MAN2C1Q9NTJ4 1040 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 RHCGQ9UBD6 479 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 SNX13Q9Y5W8 968 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 VWC2LB2RUY7 222 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 J3KTA2 159 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 M0R233 179 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 SYNGR3O43761 229 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 SERPINA1P01009 418 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ADRA2AP08913 450 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 EVX1P49640 407 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 CD47Q08722 323 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 FXNQ16595 210 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 C10orf128Q5T292 105 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 CYP4Z1Q86W10 505 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 DHFR2Q86XF0 187 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ZNF584Q8IVC4 421 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 FAM156AQ8NDB6 213 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ZNF540Q8NDQ6 660 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 SLC30A7Q8NEW0 376 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
CMTM3-215ENST00000568477 SMURF2Q9HAU4 748 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 CDH20Q9HBT6 801 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ACTR3BQ9P1U1 418 aa12.44□□□□□ -0.42
CMTM3-215ENST00000568477 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 TCRBV3S1A0A5B6 114 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 SLC22A23A1A5C7 686 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 AQP12BA6NM10 295 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 KIAA1324LA8MWY0 1029 aaPredicted RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 EFCAB9A8MZ26 197 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 H3BNX3 289 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 FFAR1O14842 300 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 SLC2A10O95528 541 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 PTHP01270 115 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 IGHV4-31P0DP07 118 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 DAOP14920 347 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 NCK1P16333 377 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 MAKP20794 623 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 GZMKP49863 264 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 MRPS34P82930 218 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 PLP2Q04941 152 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 PRKCDQ05655 676 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 ANKDD1AQ495B1 522 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 IQCCQ4KMZ1 466 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 FAM205BPQ63HN1 556 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 LCN8Q6JVE9 175 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 ZNF730Q6ZMV8 503 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 HIPK1Q86Z02 1210 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 AQP12AQ8IXF9 295 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 RNF113BQ8IZP6 322 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 ACOT11Q8WXI4 607 aaPredicted RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 HDAC2Q92769 488 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 NMD3Q96D46 503 aaKnown RBP12.43□□□□□ -0.42
CMTM3-215ENST00000568477 LRGUKQ96M69 825 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 KCNK17Q96T54 332 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 ALG12Q9BV10 488 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 KCNN2Q9H2S1 579 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 REV1Q9UBZ9 1251 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 RPS6KA6Q9UK32 745 aa12.43□□□□□ -0.42
CMTM3-215ENST00000568477 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.424e-6■■□□□ 13.3
CMTM3-215ENST00000568477 TRAV27A0A087WT01 109 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 IQCMA0A1B0GVH7 501 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 BAG2O95816 211 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 IGHMP01871 453 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 IGFBP1P08833 259 aaPredicted RBP12.42□□□□□ -0.42
CMTM3-215ENST00000568477 APEHP13798 732 aaKnown RBP12.42□□□□□ -0.42
CMTM3-215ENST00000568477 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
CMTM3-215ENST00000568477 FUT4P22083 530 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 VHLP40337 213 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 SLC9A3P48764 834 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 CTXN1P60606 82 aa12.42□□□□□ -0.42
CMTM3-215ENST00000568477 HSF2Q03933 536 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms