RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OVOL3O00110 214 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SOCS2O14508 198 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 ARPC3O15145 178 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 AHCYL1O43865 530 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 UBL3O95164 117 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 CST1P01037 141 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SCG5P05408 212 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 IGFBP1P08833 259 aaPredicted RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 OR8G3PP0DMU2 310 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 CD79AP11912 226 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 NR2C1P13056 603 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 CTLA4P16410 223 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 HOXB6P17509 224 aaKnown RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 SLC6A6P31641 620 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 CDKN2AP42771 156 aaKnown RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 GIPRP48546 466 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 PTDSS1P48651 473 aaKnown RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 ZNF84P51523 738 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 HGFACQ04756 655 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 PIGFQ07326 219 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 NPRL3Q12980 569 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 ETFDHQ16134 617 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 C11orf71Q6IPW1 123 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SLC22A25Q6T423 547 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SPNS3Q6ZMD2 512 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 ADCK1Q86TW2 530 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 DTX2Q86UW9 622 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 OR10G2Q8NGC3 310 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 FNDC8Q8TC99 324 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SMAP2Q8WU79 429 aaPredicted RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 NIPSNAP1Q9BPW8 284 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 DHRS9Q9BPW9 319 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 TRAF4Q9BUZ4 470 aaPredicted RBP8.5□□□□□ -1.05
CLK3-220ENST00000567992 NDEL1Q9GZM8 345 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SYT4Q9H2B2 425 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 SIAEQ9HAT2 523 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 NTN4Q9HB63 628 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 IL20Q9NYY1 176 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 EDARQ9UNE0 448 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 MOKQ9UQ07 419 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 LAMP3Q9UQV4 416 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 IER3IP1Q9Y5U9 82 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 ZANQ9Y493 2812 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 F8P00451 2351 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 H0YHG0 523 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 DCTN6O00399 190 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 BHLHE40O14503 412 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 XKRYO14609 159 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 MGRN1O60291 552 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 ZNF35P13682 527 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 NPR2P20594 1047 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 TTKP33981 857 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 RPS6KA3P51812 740 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 RAB1AP62820 205 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 NKX6-1P78426 367 aaPredicted RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 DBPQ10586 325 aaPredicted RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 RAB39AQ14964 217 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 CLEC12AQ5QGZ9 265 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 FAM27BQ5VT28 67 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 RASSF6Q6ZTQ3 369 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 SLC16A14Q7RTX9 510 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 HS3ST5Q8IZT8 346 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 OR4Q3Q8NH05 313 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 PIGTQ969N2 578 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 FBXO17Q96EF6 278 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 DUS3LQ96G46 650 aaKnown RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 ERMAPQ96PL5 475 aaPredicted RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 RBP7Q96R05 134 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 SNX18Q96RF0 628 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 IFT27Q9BW83 186 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 DENND2DQ9H6A0 471 aaPredicted RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 POLE4Q9NR33 117 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 ZNF701Q9NV72 531 aaPredicted RBP8.49□□□□□ -1.05
CLK3-220ENST00000567992 DNAJB9Q9UBS3 223 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 ARID1AO14497 2285 aa8.49□□□□□ -1.05
CLK3-220ENST00000567992 IGLV1-36A0A0B4J1U3 117 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 OR6C68A6NDL8 312 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 TMCC2O75069 709 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 TIPRLO75663 272 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 FARS2O95363 451 aaKnown RBP8.48□□□□□ -1.05
CLK3-220ENST00000567992 SOX14O95416 240 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 RAB36O95755 333 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 CRYAAP02489 173 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 SERPINA5P05154 406 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 CST2P09228 141 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 GAAP10253 952 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 HIST1H1CP16403 213 aaKnown RBP8.48□□□□□ -1.05
CLK3-220ENST00000567992 ZNF32P17041 273 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 LAP3P28838 519 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 PTH2RP49190 550 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ENDOGQ14249 297 aaKnown RBP8.48□□□□□ -1.05
CLK3-220ENST00000567992 SLC36A2Q495M3 483 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ZNF362Q5T0B9 420 aaPredicted RBP8.48□□□□□ -1.05
CLK3-220ENST00000567992 C1orf146Q5VVC0 180 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 RPL13AP3Q6NVV1 102 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ZNF544Q6NX49 715 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms